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Landmark coordinates aligned by procrustes analysis do not lie in Kendall's shape space

机译:通过procrustes分析对齐的地标坐标不位于Kendall的形状空间中

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The field of geometric morphometrics is concerned with methods for studying shapes of objects. These methods are increasingly used to address a broad range of ecological and evolutionary questions. A few recent examples include the study of ontogenetic reaction norms (Arnqvist and Johansson, 1998), fluctuating asymmetry (Klingenberg and McIntyre, 1998), and trophic morphology (Caldecutt and Adams, 1998). There has also been recent debate within these pages as to the appropriate place for geometric morphometrics in the context of phylogenetic analysis (Adams and Rosenberg, 1998; Rohlf, 1998a; Swiderski et al., 1998; Zelditch and Fink, 1998; Zeldtich et al., 1998). Much of our theoretical understanding of this powerful and relatively new approach to shape analysis is due to work by Kendall on the geometric and statistical properties of shape spaces defined by the Procrustes metric (Kendall, 1984, 1985). It is important thaf users of these methods appreciate the relationship between the theoretical aspects of geometric morphometrics and their practical application. This report demonstrates that the geometry of sample variation reshlting from the most commonly used geometric method, Procrustes analysis (also known as least squares superimposition), is not the same as the geometry of the shape space described by Kendall. The coordinates of landmarks after the Procrustes superimposition (with unit scaling) of a sample onto a reference lie on the surface of a (hyper)hemisphere of unit radius that, at that reference, approximates the relationships between configurations in Kendall's shape space.
机译:几何形态计量学领域涉及研究对象形状的方法。这些方法越来越多地用于解决广泛的生态和进化问题。最近的一些例子包括对本体反应规范的研究(Arnqvist和Johansson,1998),波动的不对称性(Klingenberg和McIntyre,1998)以及营养形态(Caldecutt和Adams,1998)。在这些页面上,关于系统发育分析中几何形态计量学的适当位置,最近也有争论(Adams和Rosenberg,1998; Rohlf,1998a; Swiderski等,1998; Zelditch和Fink,1998; Zeldtich等) (1998年)。我们对这种功能强大且相对较新的形状分析方法的大部分理论理解是由于肯德尔(Kendall)对由Procrustes度量定义的形状空间的几何和统计特性所做的工作(Kendall,1984,1985)。重要的是,这些方法的使用者应该理解几何形态计量学的理论方面与其实际应用之间的关系。该报告表明,从最常用的几何方法Procrustes分析(也称为最小二乘叠加)中减小的样本变化的几何形状与Kendall描述的形状空间的几何形状不同。将样品的Procrustes叠加(以单位比例缩放)到参考上之后,地标的坐标位于单位半径的(半)半球的表面上,该半球在该参考上近似于Kendall形状空间中构型之间的关系。

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