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首页> 外文期刊>Molecular and Biochemical Parasitology >Characterization of a Cryptosporidium parvum protein that binds single-stranded G-strand telomeric DNA.
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Characterization of a Cryptosporidium parvum protein that binds single-stranded G-strand telomeric DNA.

机译:结合单链G链端粒DNA的小隐孢子虫蛋白质的表征。

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We have initiated a project to characterize telomere-associated proteins of Cryptosporidium parvum. Searching public databases with C. parvum expressed sequence tag (EST) sequences revealed one EST sequence that is highly similar to Gbp1p of Chlamydomonas reinhardtii (Cr Gbp1p), a protein that binds single-stranded telomeric DNA. This EST was used to clone a gene encoding a 198 amino acids long protein (CpGbp). Sequence analysis suggested that CpGbp contains two RNA recognition motif (RRMs) domains linked with a short hinge region. RT-PCR analysis showed that the mRNA expression of CpGbp was up- and down-regulated significantly comparing to that of CpDNAPol, suggesting a potential role of CpGbp playing in the parasite's life cycle. In Western blot analysis, monoclonal antibody against recombinant CpGbp identified one band (approximately 23kDa) specifically from cell extracts of C. parvum sporozoites. Confocal microscopy analysis with anti-CpGbp antibody localized CpGbp proteins to the nucleus, consistent with its potential role in telomere length regulation. In electrophoretic mobility shift assays (EMSAs), recombinant CpGbp bound oligonucleotide TG3 that bears three copies of C. parvum telomeric DNA G-strand repeat "TTTAGG", but not C-strand or double-stranded telomeric DNA sequences. To map the binding domain and to define the binding site of CpGbp, we constructed four CpGbp deletion mutants and synthesized ten TG3 mutants and tested their binding affinities by EMSAs. We found that only the RRM domain at N-terminus has oligonucleotide-binding ability in vitro. And the minimal sequence necessary for CpGbp's binding is "GTTTAGGTTTAG". These data support the notion that CpGbp represents a C. parvum single-stranded telomeric DNA binding protein.
机译:我们已经启动了一个表征小隐孢子虫端粒相关蛋白的项目。搜索带有小隐孢子虫表达序列标签(EST)序列的公共数据库,发现一个与莱茵衣藻(Cr Gbp1p)的Gbp1p(Cr Gbp1p)高度相似的EST序列,该蛋白结合单链端粒DNA。该EST被用于克隆编码198个氨基酸长的蛋白质(CpGbp)的基因。序列分析表明,CpGbp包含两个与短铰链区相连的RNA识别基序(RRM)域。 RT-PCR分析表明,与CpDNAPol相比,CpGbp的mRNA表达显着上调和下调,表明CpGbp在寄生虫的生命周期中发挥了潜在作用。在蛋白质印迹分析中,针对重组CpGbp的单克隆抗体特异性地从细小隐孢子虫子孢子的细胞提取物中鉴定出一个条带(约23kDa)。用抗CpGbp抗体进行共聚焦显微镜分析可将CpGbp蛋白定位于细胞核,与其在端粒长度调节中的潜在作用相一致。在电泳迁移率变动分析(EMSA)中,重组CpGbp结合的寡核苷酸TG3携带三份C. parvum端粒DNA G链重复“ TTTAGG”,但不包含C链或双链端粒DNA序列。为了定位结合结构域并定义CpGbp的结合位点,我们构建了四个CpGbp缺失突变体并合成了十个TG3突变体,并通过EMSA测试了它们的结合亲和力。我们发现,只有R末端的RRM域在体外具有寡核苷酸结合能力。 CpGbp结合所需的最小序列是“ GTTTAGGTTTAG”。这些数据支持以下观点:CpGbp代表细小隐孢子虫单链端粒DNA结合蛋白。

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