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Usefulness of REP and ERIC-PCR combination for tracking the spread of Staphylococcus aureus strains

机译:REP和ERIC-PCR结合用于追踪金黄色葡萄球菌菌株传播的有用性

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摘要

Aim. Staphylococcus aureus is the cause of serious infections in humans, including endocarditis and deep-seated abscesses, which lead to toxic and septic shock syndromes. The objectives of this study were to observe whether Staphylococcus aureus strains obtained from various clinical samples collected from 21 different wards of a hospital represent identical organisms or closely related and to determine the strains belongs to the same genotype are correlated epide-miologically or not. Methods. In this study S. aureus strains, identified by conventional techniques, were tested for resistance to methicillin by disk diffusion method. Repetitive extra-genic palindromic (REP) and enterobacterial repetitive intergenic consensus (ERIC) sequences PCR fingerprinting were used to type the strains genotypically and generated patterns determined Dice coefficients of similarity. Methicillin-sensitive Staphylococcus aureus (MSSA) and methicillin-resistant Staphylococcus aureus (MRSA) strains were analyzed by the combination of REP and ERIC-PCR. Results. Forty-seven out of 67 (70%) S. aureus strains were found to be genetically related. These strains were separated into 15 types in REP and 11 types in ERIC-PCR analysis. 17 genotypes were identified by the combination of REP and ERIC-PCR. Data obtained from the analysis of this method may have an importance in clinical and epidemiological modeling. Conclusion. This study represents that combined REP and ERIC-PCR technique provides a rapid and reliable tool for investigating epidemiology in S. aureus and tracking the spread of these strains in the hospital environment.
机译:目标。金黄色葡萄球菌是导致人类严重感染的原因,包括心内膜炎和深部脓肿,这些感染会导致中毒性和败血性休克综合症。这项研究的目的是观察从医院21个不同病房收集的各种临床样品中获得的金黄色葡萄球菌菌株是否代表相同的生物或密切相关,并确定属于同一基因型的菌株在流行病学上是否相关。方法。在这项研究中,通过圆盘扩散法测试了通过常规技术鉴定的金黄色葡萄球菌菌株对甲氧西林的抗性。重复的基因外回文(REP)和肠细菌的基因间重复共识(ERIC)序列使用PCR指纹图谱对菌株进行基因型分型,并通过模式确定相似性的Dice系数。结合REP和ERIC-PCR分析了对甲氧西林敏感的金黄色葡萄球菌(MSSA)和对耐甲氧西林的金黄色葡萄球菌(MRSA)的菌株。结果。发现67株金黄色葡萄球菌中有47株(70%)与遗传相关。这些菌株在REP中分为15种,在ERIC-PCR分析中分为11种。通过REP和ERIC-PCR的组合鉴定出17种基因型。从这种方法的分析中获得的数据可能在临床和流行病学建模中具有重要意义。结论。这项研究表明,REP和ERIC-PCR的组合技术为调查金黄色葡萄球菌的流行病学和追踪这些菌株在医院环境中的传播提供了一种快速可靠的工具。

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