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首页> 外文期刊>Microbiology and Immunology >Repetitive sequence of Leptospira interrogans serovar icterohaemorrhagiae strain Ictero No. 1: a sensitive probe for demonstration of Leptospira interrogans strains.
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Repetitive sequence of Leptospira interrogans serovar icterohaemorrhagiae strain Ictero No. 1: a sensitive probe for demonstration of Leptospira interrogans strains.

机译:钩端螺旋体血清型黄疸出血性菌株Ictero 1的重复序列:灵敏钩端螺旋体菌株的示范性探针。

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摘要

A 4.8-kilobase (kb) repetitive sequence element generated with KpnI digestion was cloned from the Leptospira interrogans serovar icterohaemorrhagiae strain Ictero No. 1. The sequence, repeated in tandem, was located on the 280-kb fragment between the FseI and AscI sites on the chromosome by hybridization using the 4.8-kb fragment as a probe. We cloned the fragment containing the element for the Ictero No. 1 strain in a lambda EMBL3 bacteriophage DNA, and one out of 5 clones was sequenced. Within the sequenced 9-kb segment that partially repeated, 9 putative open-reading frames and 2 transfer RNA genes, for alanine and isoleucine, were identified. A similarity search for the products deduced from the sequenced data revealed that the repeated sequence includes both beta-oxidation enzymes, acyl-CoA dehydrogenase and enoyl-CoA hydratase, and hydroxythiazole kinase protein homologues. Hybridization experiments against different leptospiral strains using the element as a probe showed a similar sequence in the strains of L. interrogans and L. kirschneri, but not in any strains of L. borgpetersenii, L. weillii, L. meyeri or L. biflexa. Results indicated that the highly repeated element in the Ictero No. 1 strain exists as a well conserved sequence, though at a moderate level of repetition, in certain strains of L. interrogans and L. kirschneri. PCR amplification targeting the repetitive element was successful and indicated that the procedure provides a sensitive and specific probe to detect leptospires.
机译:从问号钩端螺旋体血清型icterohaemorrhagiae菌株Ictero 1号克隆了一个用KpnI消化产生的4.8 kb的重复序列元件。该序列串联重复,位于FseI和AscI位点之间280 kb的片段上。通过使用4.8-kb片段作为探针杂交获得染色体。我们在λEMBL3噬菌体DNA中克隆了包含Ictero 1号菌株元素的片段,并对5个克隆中的1个进行了测序。在部分重复的测序的9kb片段中,鉴定出9个推定的开放阅读框和2个转移RNA基因(丙氨酸和异亮氨酸)。从测序数据推导的产物的相似性搜索显示,重复序列既包含β-氧化酶,酰基-CoA脱氢酶和烯酰-CoA水合酶,也包括羟基噻唑激酶蛋白同源物。使用该元件作为探针针对不同钩端螺旋体菌株的杂交实验显示,在问号乳酸杆菌和柯氏乳酸杆菌菌株中具有相似的序列,但在伯格氏梭菌,魏氏乳酸杆菌,迈耶氏乳酸杆菌或双弯曲杆菌中没有任何菌株。结果表明,在Ictero 1号菌株中,高度重复的元件作为保守序列存在,尽管在中等水平的问号L. interrogans和L. kirschneri菌株中处于中等重复水平。靶向重复元件的PCR扩增成功,并表明该程序提供了灵敏而特异性的探针来检测钩端螺旋体。

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