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An algorithm for PET tumor volume and activity quantification: Without specifying cameras point spread function (PSF)

机译:PET肿瘤体积和活性定量的算法:不指定相机点扩散函数(PSF)

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Purpose: The authors have developed an algorithm for segmentation and removal of the partial volume effect (PVE) of tumors in positron emission tomography (PET) images. The algorithm accurately measures functional volume (FV) and activity concentration (AC) of tumors independent of the cameras full width half maximum (FWHM). Methods: A novel iterative histogram thresholding (HT) algorithm is developed to segment the tumors in PET images, which have low resolution and suffer from inherent noise in the image. The algorithm is initiated by manually drawing a region of interest (ROI). The segmented tumors are subjected to the iterative deconvolution thresholding segmentation (IDTS) algorithm, where the Van-Citterts method of deconvolution is used for correcting PVE. The IDTS algorithm is fully automated and accurately measures the FV and AC, and stops once it reaches convergence. The convergence criteria or stopping conditions are developed in such a way that the algorithm does not rely on estimating the FWHM of the point spread function (PSF) to perform the deconvolution process. The algorithm described here was tested in phantom studies, where hollow spheres (0.5-16 ml) were used to represent tumors with a homogeneous activity distribution, and an irregular shaped volume was used to represent a tumor with a heterogeneous activity distribution. The phantom studies were performed with different signal to background ratios (SBR) and with different acquisition times (1 min, 3 min, and 5 min). The parameters in the algorithm were also changed (FWHM and matrix size of the Gaussian function) to check the accuracy of the algorithm. Simulated data were also used to test the algorithm with tumors having heterogeneous activity distribution. Results: The results show that changing the size and shape of the ROI during initiation of the algorithm had no significant impact on the FV. An average FV overestimation of 30 and an average AC underestimation of 35 were observed for the smallest tumor (0.5 ml) over the entire range of noise and SBR level. The difference in average FV and AC estimations from the actual volumes were less than 5 as the tumor size increased to 16 ml. For tumors with heterogeneous activity profile, the overall volume error was less than 10. The average overestimation of FV was less than 10 and classification error was around 11. Conclusions: The algorithm developed herein was extensively tested and is not dependent on accurately quantifying the cameras PSF. This feature demonstrates the robustness of the algorithm and enables it to be applied on a wide range of noise and SBR within an image. The ultimate goal of the algorithm is to be able to be operated independent of the camera type used and the reconstruction algorithm deployed.
机译:目的:作者开发了一种算法,用于在正电子发射断层扫描(PET)图像中分割和去除肿瘤的部分体积效应(PVE)。该算法可准确测量肿瘤的功能体积(FV)和活动浓度(AC),而与相机的半高全宽(FWHM)无关。方法:开发了一种新颖的直方图阈值(HT)迭代算法,对PET图像中的肿瘤进行分割,分辨率低且存在固有噪声。通过手动绘制感兴趣区域(ROI)来启动该算法。对分割后的肿瘤进行迭代反卷积阈值分割(IDTS)算法,其中使用Van-Citterts反卷积方法校正PVE。 IDTS算法是全自动的,可以准确地测量FV和AC,并在达到收敛后停止。收敛准则或停止条件的开发方式使得算法不依赖于估计点扩展函数(PSF)的FWHM来执行反卷积过程。本文描述的算法已在幻像研究中进行了测试,其中空心球(0.5-16 ml)用于代表具有均一活性分布的肿瘤,而不规则形状的体积则用于代表具有异质活性分布的肿瘤。幻像研究使用不同的信噪比(SBR)和不同的采集时间(1分钟,3分钟和5分钟)进行。还更改了算法中的参数(FWHM和高斯函数的矩阵大小)以检查算法的准确性。模拟数据也被用于测试具有异质活性分布的肿瘤的算法。结果:结果表明,在算法启动过程中更改ROI的大小和形状对FV没有明显影响。在噪声和SBR的整个范围内,最小的肿瘤(0.5 ml)的平均FV高估了30,AC平均低估了35。随着肿瘤大小增加到16 ml,平均FV和AC估计值与实际体积的差值小于5。对于具有异质活动特征的肿瘤,总体积误差小于10。FV的平均高估小于10,分类误差约为11。结论:本文开发的算法已得到广泛测试,并且不依赖于精确定量照相机PSF。此功能演示了该算法的鲁棒性,使其能够应用于图像中的各种噪声和SBR。该算法的最终目标是能够独立于所使用的摄像机类型和所部署的重建算法进行操作。

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