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Proteomic analysis of differentially expressed proteins in lymphoid organ of Fenneropenaeus chinensis response to Vibrio anguillarum stimulation

机译:费氏弧菌刺激对费氏淋巴结淋巴器官中差异表达蛋白质的蛋白质组学分析

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To gain an insight into the function of shrimp lymphoid organ at protein level, we analyzed the proteome of lymphoid organ in healthy Chinese shrimp Fenneropenaeus chinensis (F. chinensis) through two-dimensional gel electrophoresis (2-DE) based proteomic approach. A total of 95 spots representing 75 protein entries were identified by liquid chromatography tandem mass spectrometry (LC-MS/MS) with both online and in-house database. According to Gene Ontology (GO) annotation of biological process, the identified proteins were classified into 13 categories. Among them, approximately 36% of proteins related to cytoskeleton are noticeable. Then, a comparative proteomic approach was employed to investigate the differentially expressed proteins in lymphoid organ of Vibrio anguillarum-challenged F. chinensis. At 24 h post-injection (hpi), 17 differentially expressed protein spots were successfully identified, including 4 up-regulated protein spots (represent 4 proteins: cathepsin L protein similar to squid CG16901-PC, protein kinase C and protein similar to T-complex Chaperonin 5 CG8439-PA), and 13 down-regulated protein spots (represent 9 proteins: actin, beta-actin, cytoplasmic actin CyII, alpha tubulin, beta tubulin, protein similar to proteasome delta, vacuolar ATP synthase subunit B, elongation factor 2, carboxypeptidase B). These data may help us to understand the function of lymphoid organ and the molecular immune mechanism of shrimp responsive to pathogen infection.
机译:为了深入了解虾淋巴器官在蛋白质水平上的功能,我们通过基于二维凝胶电泳(2-DE)的蛋白质组学方法分析了健康中国虾对虾淋巴器官的淋巴器官的蛋白质组。通过液相色谱串联质谱法(LC-MS / MS),通过在线和内部数据库共鉴定了代表75个蛋白质条目的95个斑点。根据生物学过程的基因本体论(GO)注释,鉴定出的蛋白质分为13类。其中,约有36%的与细胞骨架有关的蛋白质是值得注意的。然后,采用比较蛋白质组学的方法研究了鳗弧菌感染的中华小F的淋巴器官中差异表达的蛋白质。注射后24小时(hpi),成功鉴定出17个差异表达的蛋白质斑点,包括4个上调的蛋白质斑点(代表4个蛋白质:类似于鱿鱼CG16901-PC的组织蛋白酶L蛋白,类似于T-鱿鱼的蛋白激酶C和蛋白质复杂的伴侣蛋白5 CG8439-PA)和13个下调的蛋白点(代表9种蛋白:肌动蛋白,β-肌动蛋白,胞质肌动蛋白CyII,α微管蛋白,β微管蛋白,类似于蛋白酶体δ的蛋白,液泡ATP合酶B亚基,延伸因子2,羧肽酶B)。这些数据可能有助于我们了解淋巴器官的功能以及对病原体感染有反应的虾的分子免疫机制。

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