首页> 外文期刊>Evolution: International Journal of Organic Evolution >Does linkage disequilibrium generate heterozygosity-fitness correlations in great reed warblers?
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Does linkage disequilibrium generate heterozygosity-fitness correlations in great reed warblers?

机译:连锁不平衡会在伟大的芦苇莺中产生杂合度-适合度相关性吗?

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Heterozygosity-fitness correlations (HFCs) at noncoding genetic markers are commonly assumed to reflect fitness effects of heterozygosity at genomewide distributed genes in partially inbred populations. However, in populations with much linkage disequilibrium (LD), HFCs may arise also as a consequence of selection on fitness loci in the local chromosomal vicinity of the markers. Recent data suggest that relatively high levels of LD may prevail in many ecological situations. Consequently, LD may be an important factor, together with partial inbreeding, in causing HFCs in natural populations. In the present study, we evaluate whether LD can generate HFCs in a small and newly founded population of great reed warblers (Acrocephalus arundinaceus). For this purpose dyads of full siblings of which only one individual survived to adult age (i.e., returned to breed at the study area) were scored at 19 microsatellite loci, and at a gene region of hypothesized importance for survival, the major histocompatibility complex (MHC). By examining siblings, we controlled for variation in the inbreeding coefficient and thus excluded genome-wide fitness effects in our analyses. We found that recruited individuals had significantly higher multilocus heterozygosity (MLH), and mean d(2) (a microsatellite-specific variable), than their nonrecruited siblings. There was a tendency for the survivors to have a more diverse MHC than the nonsurvivors. Single-locus analyses showed that the strength of the genotype-survival association was especially pronounced at four microsatellite loci. By using genotype data from the entire breeding population, we detected significant LD between five of 162 pairs of microsatellite loci after accounting for multiple tests. Our present finding of a significant within-family multilocus heterozygosity-survival association in a nonequilibrium population supports the view that LD generates HFCs in natural populations.
机译:通常假定非编码遗传标记处的杂合度-适合度相关性(HFC)反映了部分近交群体中全基因组分布基因杂合度的适应性效应。但是,在连锁不平衡(LD)较多的人群中,由于在标记的局部染色体附近选择适应性基因座,也可能产生HFC。最近的数据表明,在许多生态环境中,LD含量较高。因此,LD与部分近交一起可能是造成自然种群中HFC的重要因素。在本研究中,我们评估了LD是否可以在少量的新近建立的大型芦苇莺(Acrocephalus arundinaceus)中产生HFC。为此目的,只有19个微卫星基因座和只有一个存活至成年的个体的成年兄弟(即在研究区域恢复繁殖),以及被认为对生存重要的基因区域(主要的组织相容性复合体)( MHC)。通过检查兄弟姐妹,我们控制了近交系数的变化,因此在我们的分析中排除了全基因组适应性效应。我们发现,与未招募的兄弟姐妹相比,新招募的个体具有更高的多基因座杂合度(MLH)和均值d(2)(微卫星特异性变量)。幸存者倾向于拥有比非幸存者更多样化的MHC。单基因座分析表明,基因型-生存关联的强度在四个微卫星基因座上尤为明显。通过使用来自整个繁殖群体的基因型数据,在考虑了多次测试后,我们在162对微卫星基因座中的五对之间检测到了显着的LD。我们目前在非平衡种群中发现的重要的家庭多基因座杂合性-生存关联的发现支持了LD在自然种群中产生HFC的观点。

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