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Artificial neural network modeling of apoptosis in gamma irradiated human lymphocytes.

机译:人工神经网络建模的γ辐照人类淋巴细胞凋亡。

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摘要

PURPOSE: To develop an artificial neural network (ANN) model of apoptotic response in gamma irradiated human lymphocytes. To assess the feasibility of training ANN radiobiological models using data collected with flow cytometry. MATERIALS AND METHODS: Irradiated isolated human lymphocytes were labelled with Annexin V-Fluorescein Isothiocyanate (FITC) and 7-Amino-Actinomycin D (7AAD) then analysed using flow cytometry. Twenty-four dose responses per donor from 14 donors were collected from a flow cytometer and used in model development as the training and cross-validation datasets. The general ANN model architecture was a multi-layer perceptron using the mean squared error of a cross validation dataset as the objective function. The ANN model was optimized by varying the number of hidden layers and the number of processing elements per layer. The optimized model constituted of three hidden layers with 80, 40, and 10 hidden layers in the first, second, and third layers respectively. RESULTS: The optimized model was used to simulate dose responses at the training doses of 0, 2, 4 and 8 Gray. A strong agreement between the model and measured dose responses was observed. The model was also used to simulate a dose response at 0.1 Gray and results were compared to the measured dose response from a donor not used in model development. Again, strong agreement between the model and the observed dose response was found. CONCLUSIONS: This study shows that artificial neural networks can be trained to provide high resolution, high accuracy models of multivariate radiobiological data collected by flow cytometry.
机译:目的:建立人工神经网络(ANN)模型的伽玛射线照射的人类淋巴细胞凋亡反应。为了评估使用流式细胞仪收集的数据训练ANN放射生物学模型的可行性。材料与方法:用膜联蛋白V-异丁烯酸氟荧光素(FITC)和7-氨基放线菌素D(7AAD)标记辐射的分离人淋巴细胞,然后使用流式细胞仪进行分析。从流式细胞仪收集来自14个供体的每个供体的二十四个剂量反应,并将其用于模型开发中作为训练和交叉验证数据集。通用的ANN模型架构是多层感知器,使用交叉验证数据集的均方误差作为目标函数。通过改变隐藏层的数量和每层处理元素的数量来优化ANN模型。优化模型由三个隐藏层组成,分别在第一,第二和第三层中分别具有80、40和10个隐藏层。结果:优化模型用于模拟0、2、4和8 Gray训练剂量下的剂量反应。观察到模型与测得的剂量反应之间有很强的一致性。该模型还用于模拟0.1 Gray时的剂量反应,并将结果与​​未用于模型开发的供体的测量剂量反应进行比较。再次,发现模型与观察到的剂量反应之间有很强的一致性。结论:这项研究表明,可以训练人工神经网络,以提供高分辨率,高精度的流式细胞仪收集的多元放射生物学数据模型。

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