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Cloning, characterization and expression analysis of a CXCL10-like chemokine from turbot (Scophthalmus maximus)

机译:大菱t(Ccophthalmus maximus)CXCL10样趋化因子的克隆,鉴定和表达分析

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Chemokines represent a superfamily of chemotactic cytokines playing an important role in leukocyte chemotaxis. We have constructed a turbot spleen cDNA library that has over 2.2 x 10(6) primary clones. Its average insert size was estimated to about 700-2000 bp by PCR of 40 randomly picked clones. A novel turbot CXC chemokine was screened from this library. Both 5'-RACE and 3'-RACE were carried out in order to obtain the complete cDNA, which contains a 79 bp 5' UTR, a 372 bp open reading frame encoding 123 amino acids and a 227 bp 3' UTR. Four exons and three introns were identified in the turbot CXC chemokine gene. The three introns were 591 bp, 86 bp and 125 bp, respectively. Both BLASTP similarity comparisons and Phylogenetic analysis showed that the turbot CXC chemokine was closer to CXCL10. Interestingly, the highest expression levels of the turbot CXC chemokine were detected at 12 h in liver and spleen after challenge with V. anguillarum and at 5 h in head kidney. The expression in liver decreased gradually after 12 h and returned the level of background after 72 h. In spleen, the expression kept high levels till 24 h and then became faint consistent with background. The expression of the CXC chemokine was not detected in normal tissues of turbot, which suggested it only was induced when challenged with V. anguillarum. These results indicated that the turbot CXC chemokine played an important role in turbot immune response.
机译:趋化因子代表趋化性细胞因子的超家族,在白细胞趋化性中起重要作用。我们已经构建了具有超过2.2 x 10(6)个主要克隆的大菱脾cDNA文库。通过对40个随机挑选的克隆进行PCR估算,其平均插入片段大小约为700-2000 bp。从该文库中筛选了一种新颖的大菱CCXC趋化因子。为了获得完整的cDNA,进行了5'-RACE和3'-RACE的完整cDNA,该cDNA包含79 bp的5'UTR,372 bp的开放阅读框,编码123个氨基酸和227 bp的3'UTR。在大菱CCXC趋化因子基因中鉴定出四个外显子和三个内含子。三个内含子分别为591 bp,86 bp和125 bp。 BLASTP相似性比较和系统发育分析均表明,大菱C CXC趋化因子更接近CXCL10。有趣的是,在用鳗弧菌攻击后第12 h在肝脏和脾脏中以及在头肾的第5 h中检测到了大菱C CXC趋化因子的最高表达水平。肝脏中的表达在12 h后逐渐降低,并在72 h后恢复本底水平。在脾脏中,该表达一直保持高水平直至24 h,然后变得与背景模糊一致。在大菱t的正常组织中未检测到CXC趋化因子的表达,这表明它仅在受到鳗弧菌攻击时才被诱导。这些结果表明,大菱CCXC趋化因子在大菱t免疫反应中起重要作用。

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