We study zeta functions enumerating submodules invariant under a given endomorphism of a finitely generated module over the ring of (S-) integers of a number field. In particular, we compute explicit formulae involving Dedekind zeta functions and establish meromorphic continuation of these zeta functions to the complex plane. As an application, we show that ideal zeta functions associated with nilpotent Lie algebras of maximal class have abscissa of convergence 2.
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