首页> 外文期刊>Gene: An International Journal Focusing on Gene Cloning and Gene Structure and Function >A key structural gene, AaLDOX, is involved in anthocyanin biosynthesis in all red-fleshed kiwifruit (Actinidia arguta) based on transcriptome analysis
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A key structural gene, AaLDOX, is involved in anthocyanin biosynthesis in all red-fleshed kiwifruit (Actinidia arguta) based on transcriptome analysis

机译:一种关键的结构基因,αAldox,基于转录组分析涉及所有红肉猕猴桃(Actinidia Arguta)的花青素生物合成

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摘要

Study on kiwifruit (Actinidia chinensis and A. deliciosa) color mainly concentrated in green and yellow-fleshed cultivars, less about molecular mechanism of red-fleshed trait formation, rarely in all red-fleshed fruit. Using 'Tianyuanhong' and 'Yongfengyihao' ('TY', a kind of all red-fleshed cultivar, from Actinidia arguta; 'YF', a kind of all green-fleshed cultivar, also from Actinidia arguta) as experimental material, we performed RNA-seq to obtain 202,742 unigenes with an average length of 603 bp and N50 of 873 bp via transcriptome data analysis. Of these unigenes, 72,508 (35.76%) were annotated and 997 were assigned to secondary metabolic pathways, of which 104 unigenes were involved in flavonoid and anthocyanin biosynthesis. According to the parameter log2fold-change and p-adjusted, 12 differentially expressed structural genes were selected for performing expression profiles and cluster analysis. Physiological traits including color ration, hue angle, and anthocyanin content were also investigated. From the results, we concluded AaLDOX (genes encoding leucoanthocyanidin dioxygenase) maybe the key gene controlling anthocyanin biosynthesis in flesh of 'TY' kiwifruit, which promoted accumulation of anthocyanin, finally leading to the red flesh coloration.
机译:Kiwifruit(Actinidia Chinensis和A. deliciosa)的颜色主要集中在绿色和黄色的品种中,少关于红斑地形成的分子机制,很少在所有红肉果实中。使用“天远红”和“永丰炎”('TY',一种所有的红肉品种,来自Actinidia Arguta;'YF',一种所有的绿色肉体品种,也是来自Actinidia Arguta)作为实验材料,我们进行了RNA-SEQ通过转录组数据分析获得202,742个unigenes,平均长度为873bp和873bp的N50。在这些unigenes中,向72,508%(35.76%)注释,997分配给次级代谢途径,其中104个unigenes参与黄酮和花青素生物合成。根据参数log2fold-change和p调整,选择12个差异表达的结构基因用于执行表达简谱和聚类分析。还研究了包括颜色配量,色调角和花青素含量的生理性状。从结果中,我们总结了αAldox(编码了白藻霉素二氧化素酶的基因),也许是控制'Ty'kiwifruit的肉体中的化学素生物合成的关键基因,促进了花青素的积累,最终导致红色肉体着色。

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