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Usefulness of gradient tree boosting for predicting histological subtype and EGFR mutation status of non-small cell lung cancer on F-18 FDG-PET/CT

机译:用于预测F-18 FDG-PET / CT的非小细胞肺癌的组织学亚型和EGFR突变状态的梯度树增强的有用性

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Objective To develop and evaluate a radiomics approach for classifying histological subtypes and epidermal growth factor receptor (EGFR) mutation status in lung cancer on PET/CT images. Methods PET/CT images of lung cancer patients were obtained from public databases and used to establish two datasets, respectively to classify histological subtypes (156 adenocarcinomas and 32 squamous cell carcinomas) and EGFR mutation status (38 mutant and 100 wild-type samples). Seven types of imaging features were obtained from PET/CT images of lung cancer. Two types of machine learning algorithms were used to predict histological subtypes and EGFR mutation status: random forest (RF) and gradient tree boosting (XGB). The classifiers used either a single type or multiple types of imaging features. In the latter case, the optimal combination of the seven types of imaging features was selected by Bayesian optimization. Receiver operating characteristic analysis, area under the curve (AUC), and tenfold cross validation were used to assess the performance of the approach. Results In the classification of histological subtypes, the AUC values of the various classifiers were as follows: RF, single type: 0.759; XGB, single type: 0.760; RF, multiple types: 0.720; XGB, multiple types: 0.843. In the classification of EGFR mutation status, the AUC values were: RF, single type: 0.625; XGB, single type: 0.617; RF, multiple types: 0.577; XGB, multiple types: 0.659. Conclusions The radiomics approach to PET/CT images, together with XGB and Bayesian optimization, is useful for classifying histological subtypes and EGFR mutation status in lung cancer.
机译:目的旨在开发和评估肺癌肺癌中组织学亚型和表皮生长因子受体(EGFR)突变状态的辐射瘤方法。方法从公共数据库获得肺癌患者的PET / CT图像,并分别用于分别进行两种数据集,分别分类组织学亚型(156腺癌和32个鳞状细胞癌)和EGFR突变状态(38突变体和100个野生型样品)。从肺癌的PET / CT图像获得七种类型的成像特征。两种类型的机器学习算法用于预测组织学亚型和EGFR突变状态:随机林(RF)和梯度树升压(XGB)。分类器使用单个类型或多种类型的成像功能。在后一种情况下,贝叶斯优化选择了七种成像特征的最佳组合。接收器操作特征分析,曲线(AUC)下的区域,并用于评估方法的性能。结果在组织学亚型的分类中,各种分类器的AUC值如下:RF,单型:0.759; XGB,单一类型:0.760; RF,多种类型:0.720; XGB,多种类型:0.843。在EGFR突变状态的分类中,AUC值为:RF,单型:0.625; XGB,单型:0.617; RF,多种类型:0.577; XGB,多种类型:0.659。结论宠物/ CT图像的射出方法与XGB和贝叶斯优化一起用于对肺癌中的组织学亚型和EGFR突变状态进行分类。

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