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首页> 外文期刊>Acta crystallographica. Section F, Structural biology communications >N-Benzylnicotinamide and N-benzyl-1,4-dihydronicotinamide: useful models for NAD(+) and NADH
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N-Benzylnicotinamide and N-benzyl-1,4-dihydronicotinamide: useful models for NAD(+) and NADH

机译:N-苄基硝基酰胺和N-苄基-1,4-二氢氨基酰胺:NAD(+)和NADH的有用模型

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摘要

3-Aminocarbonyl-1-benzylpyridinium bromide (N-benzylnicotinamide, BNA), C13H13N2O+center dot Br-, (I), and 1-benzyl-1,4-dihydropyridine-3-carboxamide (N-benzyl-1,4-dihydronicotinamide, rBNA), C13H14N2O, (II), are valuable model compounds used to study the enzymatic cofactors NAD(P)(+) and NAD(P) H. BNAwas crystallized successfully and its structure determined for the first time, while a low-temperature high-resolution structure of rBNA was obtained. Together, these structures provide the most detailed view of the reactive portions of NAD(P)(+) and NAD(P) H. The amide group in BNA is rotated 8.4 (4)degrees out of the plane of the pyridine ring, while the two rings display a dihedral angle of 70.48 (17)degrees. In the rBNA structure, the dihydropyridine ring is essentially planar, indicating significant delocalization of the formal double bonds, and the amide group is coplanar with the ring [dihedral angle = 4.35 (9)degrees]. This rBNA conformation may lower the transition-state energy of an ene reaction between a substrate double bond and the dihydropyridine ring. The transition state would involve one atom of the double bond binding to the carbon ortho to both the ring N atom and the amide substituent of the dihydropyridine ring, while the other end of the double bond accepts an H atom from the methylene group para to the N atom.
机译:3-氨基羰基-1-苄基吡啶溴化吡啶(N-苄基甲酰胺,BNA),C13 -13N2O +中心点BR-,(I)和1-苄基-1,4-二氢吡啶-3-甲酰胺(N-苄基-1,4-二氢辛酰胺,RBNA),C1314N2O,(II)是用于研究酶促辅因子NAD(+)和NAD(P)H.Bnawas成功结晶的酶和NAD的有价值的模型化合物,并且其结构首次测定其结构而低获得了RBNA的温度高分辨率结构。这些结构一起提供NAD(P)(+)和NAD(P)H的反应性部分的最详细视图。BNA中的酰胺基团在吡啶环的平面中旋转8.4(4)点,两个环显示出70.48(17)度的二面角。在RBNA结构中,二氢吡啶环基本上是平面的,表明正式双键的显着删除,并且酰胺基团是共环的[二面角= 4.35(9)度]。该RBNA构象可以降低衬底双键与二氢吡啶环之间的烯丙基反应的过渡 - 状态能量。过渡状态将涉及双键与碳邻孔的一个原子与二氢吡啶环的环N原子和酰胺取代基一起,而双键的另一端接受来自亚甲基对亚甲基的H原子n原子。

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