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Vanadyl as a Stable Structural Mimic of Reactive Ferryl Intermediates in Mononuclear Nonheme-Iron Enzymes

机译:钒基作为单核不血脂 - 铁酶中的反应性渡轮中间体的稳定结构模拟

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摘要

The iron(II)- and 2-(oxo)glutarate-dependent (Fe/2OG) oxygenases catalyze an array of challenging transformations via a common iron(IV)-oxo (ferryl) intermediate, which in most cases abstracts hydrogen (H?) from an aliphatic carbon of the substrate. Although it has been shown that the relative disposition of the Fe–O and C–H bonds can control the rate of H? abstraction and fate of the resultant substrate radical, there remains a paucity of structural information on the actual ferryl states, owing to their high reactivity. We demonstrate here that the stable vanadyl ion [(VIV-oxo)2+] binds along with 2OG or its decarboxylation product, succinate, in the active site of two different Fe/2OG enzymes to faithfully mimic their transient ferryl states. Both ferryl and vanadyl complexes of the Fe/2OG halogenase, SyrB2, remain stably bound to its carrier protein substrate (l-aminoacyl-S-SyrB1), whereas the corresponding complexes harboring transition metals (Fe, Mn) in lower oxidation states dissociate. In the well-studied taurine:2OG dioxygenase (TauD), the disposition of the substrate C–H bond relative to the vanadyl ion defined by pulse electron paramagnetic resonance methods is consistent with the crystal structure of the reactant complex and computational models of the ferryl state. Vanadyl substitution may thus afford access to structural details of the key ferryl intermediates in this important enzyme class.]]>
机译:<![cdata [ src ='http://pubs.acs.org/appl/literatum/publisher/achs/journals/content/inocaj/2017/inocaj.2017.56.iseue-21/acs.inorgchem.7b02113/ 20171031 /图像/介质/ IC-2017-02113N_0006.gif“>铁(II) - 和2-(Oxo)戊二余醛依赖性(Fe / 2g)氧气酶通过普通铁(iv)催化一系列具有挑战性的变换 - Oxo(Ferryl)中间体,在大多数情况下,其中摘要来自基材的脂族碳的氢气(H 2)。虽然已经表明,Fe-O和C-H键的相对配置可以控制H的速率?由于其高反应性,仍然存在对实际渡轮态的结构信息的抽象和命运。我们在此证明,稳定的钒酰基离子[(v 静脉/ sup> -oxo) 2 + / sup>]与2g或其脱羧产品琥珀酸盐一起结合,在两种不同的活动位点Fe / 2g酶忠实地模仿他们的瞬态渡轮状态。 Fe / 2g卤素酶,SyrB2的偶发和钒基复合物均保持稳定地与其载体蛋白质基质(L-氨基酰基 - -SyrB1)结合,而相应的复合物覆盆化合物(Fe,Mn )在较低的氧化州解离。在研究良好的牛磺酸:2og DiOxygenase(Taud)中,基材C-H键相对于由脉冲电子顺磁共振方法限定的钒酰基离子的配置与官方反应复合物的晶体结构一致,以及渡轮的计算模型状态。因此,甲酰基替代可能在该重要酶类中获得关键渡轮中间体的结构细节。]]>

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    Department of Chemistry and Department of Biochemistry and Molecular Biology The Pennsylvania State University University Park Pennsylvania 16802 United States;

    Department of Chemistry and Department of Biochemistry and Molecular Biology The Pennsylvania State University University Park Pennsylvania 16802 United States;

    Department of Chemical Physiology and The Skaggs Institute for Chemical Biology The Scripps Research Institute 10550 North Torrey Pines Road La Jolla California 92037 United States;

    Department of Chemistry and Department of Biochemistry and Molecular Biology The Pennsylvania State University University Park Pennsylvania 16802 United States;

    Department of Chemistry and Department of Biochemistry and Molecular Biology The Pennsylvania State University University Park Pennsylvania 16802 United States;

    Department of Chemistry and Department of Biochemistry and Molecular Biology The Pennsylvania State University University Park Pennsylvania 16802 United States;

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  • 正文语种 eng
  • 中图分类 化学;
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