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首页> 外文期刊>Journal of Molecular Biology >Crystal structures and enzyme mechanisms of a dual fucose mutarotase/ribose pyranase.
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Crystal structures and enzyme mechanisms of a dual fucose mutarotase/ribose pyranase.

机译:双岩藻糖诱变酶/核糖吡喃酶的晶体结构和酶机制。

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Escherichia coli FucU (Fucose Unknown) is a dual fucose mutarotase and ribose pyranase, which shares 44% sequence identity with its human counterpart. Herein, we report the structures of E. coli FucU and mouse FucU bound to L-fucose and delineate the catalytic mechanisms underlying the interconversion between stereoisomers of fucose and ribose. E. coli FucU forms a decameric toroid with each active site formed by two adjacent subunits. While one subunit provides most of the fucose-interacting residues including a catalytic tyrosine residue, the other subunit provides a catalytic His-Asp dyad. This active-site feature is critical not only for the mutarotase activity toward L-fucose but also for the pyranase activity toward D-ribose. Structural and biochemical analyses pointed that mouse FucU assembles into four different oligomeric forms, among which the smallest homodimeric form is most abundant and would be the predominant species under physiological conditions. This homodimer has two fucose-binding sites that are devoid of the His-Asp dyad and catalytically inactive, indicating that the mutarotase and the pyranase activities appear dispensable in vertebrates. The defective assembly of the mouse FucU homodimer into the decameric form is due to an insertion of two residues at the N-terminal extreme, which is a common aspect of all the known vertebrate FucU proteins. Therefore, vertebrate FucU appears to serve for as yet unknown function through the quaternary structural alteration.
机译:大肠杆菌FucU(岩藻糖未知)是一种岩藻糖诱变酶和核糖吡喃糖酶的双重酶,与人类对应物具有44%的序列同一性。在这里,我们报告大肠杆菌FucU和小鼠FucU绑定到L-岩藻糖的结构,并描绘了岩藻糖和核糖的立体异构体之间相互转化的基础催化机制。大肠杆菌FucU形成十聚体环面,每个活性位点由两个相邻的亚基形成。一个亚基提供了大多数与岩藻糖相互作用的残基,包括催化酪氨酸残基,而另一个亚基提供了催化的His-Asp二聚体。该活性部位特征不仅对于针对L-岩藻糖的诱变酶活性而且对于针对D-核糖的吡喃酶活性都是至关重要的。结构和生化分析表明,小鼠FucU组装成四种不同的寡聚形式,其中最小的同二聚体形式最为丰富,在生理条件下将是主要物种。该同源二聚体具有两个岩藻糖结合位点,这些位点不含His-Asp二聚体并且具有催化活性,这表明突变蛋白和吡喃酶活性似乎在脊椎动物中是可有可无的。小鼠FucU同型二聚体组装成十聚体的缺陷是由于在N末端极端插入了两个残基,这是所有已知脊椎动物FucU蛋白的共同特征。因此,脊椎动物FucU似乎通过四级结构改变起着未知的作用。

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