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Translocation of α -helix chains through a nanopore

机译:α-螺旋链通过纳米孔的移位

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The translocation of α -helix chains through a nanopore is studied through Langevin dynamics simulations. The α -helix chains exhibit several different characteristics about their average translocation times and the α -helix structures when they transport through the nanopores under the driving forces. First, the relationship between average translocation times τ and the chain length N satisfies the scaling law, τ~ Nα, and the scaling exponent α depends on the driving force f for the small forces while it is close to the Flory exponent () in the other force regions. For the chains with given chain lengths, it is observed that the dependence of the average translocation times can be expressed as τ~ f-1/2 for the small forces while can be described as τ~f in the large force regions. Second, for the large driving force, the average number of α -helix structures N_h decreases first and then increases in the translocation process. The average waiting time of each bead, especially of the first bead, is also dependent on the driving forces. Furthermore, an elasticity spring model is presented to reasonably explain the change of the α -helix number during the translocation and its elasticity can be locally damaged by the large driving forces. Our results demonstrate the unique behaviors of α -helix chains transporting through the pores, which can enrich our insights into and knowledge on biopolymers transporting through membranes.
机译:通过兰格文动力学模拟研究了α-螺旋链通过纳米孔的移位。当α-螺旋链在驱动力下通过纳米孔传输时,它们的平均移位时间和α-螺旋结构表现出几种不同的特性。首先,平均移位时间τ与链长N之间的关系满足比例定律τ〜Nα,并且比例指数α取决于小力的驱动力f,而在接近于Flory指数()的情况下。其他部队地区。对于给定链长的链,观察到平均移位时间的依赖性对于小力可以表示为τ〜f-1 / 2,而对于大力区域可以表示为τ〜f。其次,对于大的驱动力,α-螺旋结构的平均数目N_h在移位过程中先降低然后增加。每个小珠,尤其是第一个小珠的平均等待时间也取决于驱动力。此外,提出了一种弹性弹簧模型,以合理地解释移位过程中α-螺旋数的变化,其弹性可能会因较大的驱动力而局部受损。我们的结果表明,α-螺旋链通过孔传输的独特行为,可以丰富我们对生物聚合物通过膜传输的见解和知识。

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