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Towards Translation of Discrete Frequency Infrared Spectroscopic Imaging for Digital Histopathology of Clinical Biopsy Samples

机译:致力于临床活检样本数字组织病理学的离散红外光谱成像的翻译

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Fourier transform infrared (FT-IR) spectroscopic imaging has been widely tested as a tool for stainless digital histology of biomedical specimens, including for the identification of infiltration and fibrosis in endomyocardial biopsy samples to assess transplant rejection. A major barrier in Clinical translation has been the slow speed of imaging. To address this need; we tested and report here the viability of using high speed discrete frequency infrared (DFIR) imaging to:, obtain stain-free biochemical imaging in cardiovascular samples collected from patients. Images obtained by this method were classified with high accuracy by a Bayesian classification algorithm trained on FT-IR imaging data as well as on DFIR data. A single spectral feature correlated with instances of fibrosis, as identified by the pathologist; highlights the advantage of the DFIR imaging approach for rapid detection. The speed of digital pathologic recognition was-at least,16 times faster than the fastest FT-IR imaging instrument. These results indicate that a fast, on-site identification of fibrosis using IR imaging has potential for real time assistance during surgeries. Further, the work describes development and applications of supervised classifiers on DFIR imaging data, comparing classifiers developed on FT-Ilk. and DFIR imaging modalities and identifying specific spectral features for accurate identification of fibrosis. This addresses a topic of much debate on the use of training data and cross-modality validity of IR measurements. Together, the work is a step toward addressing a Clinical diagnostic need at acquisition time scales that make IR imaging technology practical for medical Use.
机译:傅里叶变换红外(FT-IR)光谱成像已被广泛用作生物医学标本的不锈钢数字组织学检查工具,包括用于识别心内膜活检样本中的浸润和纤维化以评估移植排斥反应。临床翻译的主要障碍是成像速度慢。为了满足这一需求;我们在此测试并报告了使用高速离散频率红外(DFIR)成像来:从患者收集的心血管样本中获得无污染的生化成像的可行性。通过贝叶斯分类算法对通过此方法获得的图像进行高精度分类,该算法在FT-IR成像数据和DFIR数据上训练。病理学家发现,单个光谱特征与纤维化有关。强调了DFIR成像方法进行快速检测的优势。数字病理识别的速度至少是最快的FT-IR成像仪器的16倍。这些结果表明,使用IR成像对纤维化进行快速,现场的鉴定有可能在手术期间提供实时帮助。此外,通过比较在FT-Ilk上开发的分类器,该工作描述了基于DFIR成像数据的监督分类器的开发和应用。和DFIR成像模式,并识别特定的光谱特征,以准确识别纤维化。这解决了关于训练数据的使用和红外测量的交叉模态有效性的许多争论的话题。总之,这项工作是朝着满足获取时间尺度满足临床诊断需求迈出的一步,这使得IR成像技术可实际用于医疗用途。

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