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Monitoring Dynamic Changes in Lymph Metabolome of Fasting and Fed Rats by Electrospray Ionization-Ion Mobility Mass Spectrometry (ESI-IMMS)

机译:通过电喷雾电离-离子淌度质谱法(ESI-IMMS)监测禁食和进食大鼠淋巴代谢组的动态变化

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Ambient pressure ion mobility time-of-flight mass spectrometry (IMMS) has recently emerged as a rapid and efficient analytical technique for applications to metabolomics. An important application of metabolomics is to monitor metabolome shifts caused by stress due to toxin exposure, nutritional changes, or disease. The research presented in this paper uses IMMS to monitor metabolic changes in rat lymph fluid caused by dietary stresses over time. Extracts of metabolites found in the lymph fluid collected from dietary stressed rats were subjected to analysis by electrospray (ESI) IMMS operated both in positive and negative ion detection mode. Metabolites detected were tentatively identified based on their mass to charge ratio (m/z). In one sample, 1180 reproducible tentative metabolite ions were detected in negative mode and 1900 reproducible tentative metabolite ions detected in positive mode. Only biologically reproducible ions, defined as metabolite ions that were measured in different rate under the same treatment, were analyzed to reduce the complexity of the data. A metabolite peak list including m/z, mobility, and intensity generated for each metabolome was used to perform principle component analysis (PCA). Dynamic changes in metabolomes were investigated using principle components PC1 and PC2 that described 62percent of the variation of the system in positive mode and 81percent of the variation of the system in negative mode. Analysis of variance (ANOVA) was performed for PC1 and PC2 and means were statistically evaluated. Profiles of intensities were compared for tentative metabolite ions detected at different times before and after the rats were fed to identify the metabolites that were changing the most. Mobility-mass correlation curves (MMCC) were investigated for the different classes of compounds.
机译:环境压力离子迁移率飞行时间质谱(IMMS)最近作为一种快速高效的分析技术出现,可用于代谢组学。代谢组学的重要应用是监测由毒素暴露,营养变化或疾病引起的压力引起的代谢组变化。本文中提出的研究使用IMMS来监测饮食压力引起的大鼠淋巴液代谢随时间的变化。从饮食压力大鼠收集的淋巴液中发现的代谢物提取物通过电喷雾(ESI)IMMS进行分析,IMMS在正离子和负离子检测模式下运行。根据其质荷比(m / z)暂时确定检测到的代谢物。在一个样品中,以负模式检测到1180个可重现的暂定代谢物离子,以正模式检测到1900个可重现的暂定代谢物离子。仅分析了在同一处理下以不同速率测量的生物可再生离子(定义为代谢物离子),以降低数据的复杂性。使用每个代谢组产生的代谢物峰列表(包括m / z,迁移率和强度)进行主成分分析(PCA)。使用主要成分PC1和PC2研究了代谢组中的动态变化,它们描述了正向模式下系统变化的62%和负向模式下系统的81%。对PC1和PC2进行方差分析(ANOVA),并对均值进行统计学评估。比较了在喂食大鼠之前和之后的不同时间检测到的暂定代谢物离子的强度曲线,以确定变化最大的代谢物。研究了不同类别化合物的迁移率-质量相关曲线(MMCC)。

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