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Artificial Neural Network Study of Whole-Cell Bacterial Bioreporter Response Determined Using Fluorescence Flow Cytometry

机译:用荧光流式细胞术确定全细胞细菌生物报告反应的人工神经网络研究

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摘要

Genetically engineered bioreporters are an excellent complement to traditional methods of chemical analysis. The application of fluorescence flow cytometry to detection of bioreporter response enables rapid and efficient characterization of bacterial bioreporter population response on a single-cell basis. In the present study, intrapopula-tion response variability was used to obtain higher analytical sensitivity and precision. We have analyzed flow cytometric data for an arsenic-sensitive bacterial bioreporter using an artificial neural network-based adaptive clustering approach (a single-layer perceptron model). Results for this approach are far superior to other methods that we have applied to this fluorescent bioreporter (e.g., the arsenic detection limit is 0.01 mu M, substantially lower than for other detection methods/algorithms). The approach is highly efficient computationally and can be implemented on a real-time basis, thus having potential for future development of high-throughput screening applications.
机译:基因工程生物报告者是传统化学分析方法的绝佳补充。荧光流式细胞术在检测生物报告者应答中的应用使得能够在单细胞的基础上快速有效地表征细菌生物报告者群体的应答。在本研究中,群体内响应变异性用于获得更高的分析灵敏度和精度。我们已经使用基于人工神经网络的自适应聚类方法(单层感知器模型)对砷敏感细菌生物报告者的流式细胞仪数据进行了分析。此方法的结果远远优于我们已应用于此荧光生物报告器的其他方法(例如,砷的检出限为0.01μM,大大低于其他检出方法/算法)。该方法在计算上是高效的,并且可以在实时基础上实施,因此有可能在未来开发高通量筛选应用程序。

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