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Epidemic modeling in metapopulation systems with heterogeneous coupling pattern: Theory and simulations

机译:具有异质耦合模式的种群种群系统的流行病建模:理论与模拟

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摘要

The spatial structure of populations is a key element in the understanding of the large-scale spreading of epidemics. Motivated by the recent empirical evidence on the heterogeneous properties of transportation and commuting patterns among urban areas, we present a thorough analysis of the behavior of infectious diseases in metapopulation models characterized by heterogeneous connectivity and mobility patterns. We derive the basic reaction-diffusion equations describing the metapopulation system at the mechanistic level and derive an early stage dynamics approximation for the subpopulation invasion dynamics. The analytical description uses a homogeneous assumption on degree block variables that allows us to take into account arbitrary degree distribution of the metapopulation network. We show that along with the usual single population epidemic threshold the metapopulation network exhibits a global threshold for the subpopulation invasion. We find an explicit analytic expression for the invasion threshold that determines the minimum number of individuals traveling among subpopulations in order to have the infection of a macroscopic number of subpopulations. The invasion threshold is a function of factors such as the basic reproductive number, the infectious period and the mobility process and it is found to decrease for increasing network heterogeneity. We provide extensive mechanistic numerical Monte Carlo simulations that recover the analytical finding in a wide range of metapopulation network connectivity patterns. The results can be useful in the understanding of recent data driven computational approaches to disease spreading in large transportation networks and the effect of containment measures such as travel restrictions. (C) 2007 Elsevier Ltd. All rights reserved.
机译:人口的空间结构是理解流行病大规模传播的关键因素。受近期关于城市间交通和通勤模式异质性的经验证据的启发,我们对以异质连通性和流动性模式为特征的种群模型中的传染病行为进行了全面分析。我们推导了在机制水平上描述元种群系统的基本反应扩散方程式,并得出了亚种群入侵动力学的早期动力学近似。分析性描述对度数块变量使用同质假设,这使我们能够考虑后代网络的任意度数分布。我们显示,与通常的单一人群流行阈值相比,超种群网络展示了亚种群入侵的全局阈值。我们发现了一种入侵阈值的显式解析表达式,该表达式确定了在亚种群之间旅行的最小个体数,以便感染宏观数目的亚种群。入侵阈值是诸如基本生殖数,感染期和迁移过程等因素的函数,并且发现其随着网络异质性的增加而降低。我们提供了广泛的力学数值蒙特卡洛模拟,可恢复各种大范围种群网络连接模式中的分析结果。该结果可用于了解有关大型交通网络中疾病传播的最新数据驱动计算方法以及诸如旅行限制之类的遏制措施的效果。 (C)2007 Elsevier Ltd.保留所有权利。

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