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首页> 外文期刊>Journal of the Royal Society Interface >Modelling the time-dependent transmission rate for porcine circovirus type 2(PCV2)in pigs using data from serial transmission experiments
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Modelling the time-dependent transmission rate for porcine circovirus type 2(PCV2)in pigs using data from serial transmission experiments

机译:使用来自串行传播实验的数据对猪圆环病毒2型(PCV2)在猪中的时间依赖性传播速率进行建模

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摘要

Six successive transmission trials were carried out from 4 to 39 days post inoculation(DPI)to determine the features of the infectious period for PCV2-infected pigs.The infectiousness of inoculated pigs,assessed from the frequency of occurrence of infected pigs in susceptible groups in each contact trial,increased from 4 to 18 DPI(0,7 and 8 infected pigs at 4,11 and 18 DPI,respectively)and then decreased slowly until 39 days post infection(4,2 and 1 pigs infected at 25,32 and 39 DPI,respectively).The estimated time-dependent infectiousness was fitted to three unimodal function shapes(gamma,Weibull and lognormal)for comparison.The absence of infected pigs at 4 DPI revealed a latency period between 4 and 10 DPI.A sensitivity analysis was performed to test whether the parametric shape of the transmission function influenced the estimations.The estimated time-dependent transmission rate was implemented in a deterministic SEIR model and validated by comparing the model prediction with external data.The lognormal-like function shape evidenced the best quality of fit,leading to a latency period of 8 days,an estimated basic reproduction ratio of 5.9[1.8,10.1]and a mean disease generation time of 18.4 days[18.2,18.5].
机译:接种后4到39天进行了六次连续传播试验,以确定PCV2感染猪的感染期特征。根据感染猪在易感人群中的出现频率评估接种猪的感染性。每次接触试验,从4到18 DPI(分别在4,11和18 DPI的0,7和8头受感染的猪)增加,然后缓慢降低直至感染后39天(在4,25和32处被感染的4,2和1头猪)分别将39 DPI估计的时间依赖性传染性与三种单峰函数形状(γ,Weibull和对数正态)拟合以进行比较.4 DPI时无感染猪暴露出潜伏期在4到10 DPI之间。进行了测试以检验传递函数的参数形状是否影响估计。在确定的SEIR模型中实现了估计的随时间变化的传输速率,并通过将模型预测与外部最终数据。类似对数正态的函数形状证明了最佳的拟合质量,导致潜伏期为8天,估计的基本繁殖率为5.9 [1.8,10.1],平均疾病发生时间为18.4天[18.2,18.5]。 ]。

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