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Detection of Shigella spp. in food with a nested PCR method - sensitivity and performance compared with a conventional culture method

机译:志贺氏菌的检测。巢式PCR方法在食品中的应用-与常规培养方法相比灵敏度和性能更高

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A nested PCR method was developed and its performance evaluated by detection of Shigella flexneri in food. The nested PCR amplifies sequences within an invasion-associated locus (ial) on the invasion plasmid specific for Shigella and enteroinvasive Escherichia coli (EIEC). The nested PCR detected Sh. flexneri in lettuce inoculated with 2, 20 and 200 cfu g~(-1) after 1, 7 and 18 d of storage, respectively. In comparison, a culture method (NMKL no. 151) detected 10~5 cfu g~(-1) after 1 but not after 7 d of storage. The presence of inhibitors in blue cheese and shrimps reduced the sensitivity of the PCR assay. To overcome this inhibition, a sample preparation step based on buoyant density centrifugation was developed. This treatment resulted in a successful recovery of Sh. flexneri in lettuce, milk, shrimp and blue cheese inoculated with 10 cfu g~(-1). The proposed method, which includes a combination of enrichment, buoyant density centrifugation and a nested PCR, can be completed in less than two working days.
机译:开发了一种巢式PCR方法,并通过检测食品中的志贺氏志贺氏菌来评估其性能。嵌套式PCR扩增了针对志贺氏菌和肠道侵袭性大肠杆菌(EIEC)的侵袭质粒上的侵袭相关基因座(ial)内的序列。巢式PCR检测到Sh。分别在1、7和18 d贮藏后分别接种2、20和200 cfu g〜(-1)的莴苣中的弯曲杆菌。相比之下,培养方法(NMKL第151号)在储存1天后检测到10〜5 cfu g〜(-1),但在储存7天后未检测到。蓝纹奶酪和虾中存在抑制剂会降低PCR分析的灵敏度。为了克服这种抑制,开发了基于浮力密度离心的样品制备步骤。该处理导致Sh的成功恢复。在生菜,牛奶,虾和蓝纹奶酪中接种10 cfu g〜(-1)的flexneri。所提出的方法,包括富集,浮力密度离心和嵌套式PCR的组合,可以在不到两个工作日内完成。

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