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首页> 外文期刊>Transactions of the ASABE >HYPERSPECTRAL MICROSCOPE IMAGING METHODS TO CLASSIFY GRAM-POSITIVE AND GRAM-NEGATIVE FOODBORNE PATHOGENIC BACTERIA
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HYPERSPECTRAL MICROSCOPE IMAGING METHODS TO CLASSIFY GRAM-POSITIVE AND GRAM-NEGATIVE FOODBORNE PATHOGENIC BACTERIA

机译:超光谱显微成像法对革兰氏阳性和革兰氏阴性食源性细菌的分类

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An acousto-optic tunable filter (AOTF)-based hyperspectral microscope imaging (HMI) method has potential for rapid identification of foodborne pathogenic bacteria from micro-colonies with a cell level. In this study, we successfully developed a method to acquire quality hyperspectral microscopic images from various gram-negative and gram-positive bacteria live cells. Among the contiguous spectral images from the visible/NIR region between 450 and 800 nm, the scattering intensity of spectral images was distinct at mostly visible wavelengths. Specifically, the scattering peak intensity was distinct at 458, 498, 522, 546, 574, 590, 646, 670, and 690 nm for Staphylococcus. Similarly, distinct peak spectra were observed at 462, 498, 522, 546, 574, 598, 642, 670, and 690 nm for Salmonella. For both cases, the scattering intensity of outer cell membranes was brighter than that of inner membranes except at 546 nm, which was possibly caused by excitation of the metal-halide lighting source. The scattering intensity from a single cell varied with the wavelength as well as the type of bacteria. The overall variability of intensity was 31.2% for gram-negative (Salmonella) and 42.7% for gram-positive (Staphylococcus) bacteria. With scattering intensity data from five serotypes of Salmonella (Kentucky, Enteritidis, Typhimurium, Infantis, and Heidelberg) and five species of Staphylococcus (aureus, haemolyticus, hyicus, simulans, and sciuri) bacterial cells, a classification accuracy of 99.9% with a kappa coefficient of 0.9998 was obtained from the support vector machine (SVM) classification algorithm.
机译:基于声光可调滤光片(AOTF)的高光谱显微镜成像(HMI)方法具有从细胞水平上快速鉴定微菌落中食源性致病细菌的潜力。在这项研究中,我们成功地开发了一种从各种革兰氏阴性和革兰氏阳性细菌活细胞中获取高质量高光谱显微图像的方法。在来自可见光/近红外区域的450至800 nm之间的连续光谱图像中,光谱图像的散射强度在大部分可见波长处是不同的。具体而言,对于葡萄球菌,散射峰强度在458、498、522、546、574、590、646、670和690 nm处不同。同样,沙门氏菌在462、498、522、546、574、598、642、670和690 nm处观察到明显的峰光谱。对于这两种情况,细胞外膜的散射强度都比内膜的强,但在546 nm处除外,这可能是由金属卤化物光源的激发引起的。来自单个细胞的散射强度随波长和细菌类型而变化。革兰氏阴性(沙门氏菌)强度的总体变化为31.2%,革兰氏阳性(葡萄球菌)细菌的强度的总体变化为42.7%。利用来自五种血清型沙门氏菌(肯塔基州,肠炎,伤寒,Infantis和海德堡)和五种葡萄球菌(金黄色葡萄球菌,溶血性,hyicus,simulans和sciuri)细菌细胞的散射强度数据,分类准确度为99.9%,kappa从支持向量机(SVM)分类算法获得系数0.9998。

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