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首页> 外文期刊>The Journal of Antimicrobial Chemotherapy >Quantification of HIV-RNA from dried blood spots using the Siemens VERSANT(R) HIV-1 RNA (kPCR) assay.
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Quantification of HIV-RNA from dried blood spots using the Siemens VERSANT(R) HIV-1 RNA (kPCR) assay.

机译:使用Siemens VERSANT HIV-1 RNA(kPCR)分析法对干血点中的HIV-RNA进行定量。

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摘要

OBJECTIVES: Simplified methods for virological monitoring in resource-limited settings are increasingly needed. We evaluated the performance of the VERSANT((R)) HIV-1 RNA (kPCR) assay for the determination of HIV-1 viral load from dried blood spots (DBS). Assay sensitivity and correlation with plasma quantification values were assessed. METHODS: A total of 98 DBS were prepared from fresh blood samples of HIV-infected patients. DBS were kept at room temperature for 6 weeks or 7 months before processing while the corresponding plasma samples were stored at -80 degrees C. DBS were first pre-treated in a special DBS buffer. The DBS extracts and the plasma samples were then purified and amplified using the VERSANT assay reagents. RESULTS: In the first series of tests, performed after 6 weeks of storage, there was good correlation between quantification of viral load in plasma and in DBS (r = 0.95, P < 0.001). The detection rate in DBS was 100% when plasma levels were >1000 copies/mL. The sensitivity and specificity of the DBS assay were 88.2% [95% confidence interval (CI) 79.4-93.6] and 69.2% (95% CI 42.0-87.4), respectively. Using the 5000 copies/mL threshold (defining virological failure in resource-limited settings), both positive and negative predictive values were high (95.2% and 87.5%, respectively). After 7 months of storage there was a modest decrease in the detection rate and less significant correlations for samples with HIV-RNA <5000 copies/mL. CONCLUSIONS: Quantification of HIV-RNA from DBS by the VERSANT automated sample preparation and detection method can be used to diagnose virological failure in HIV-positive patients.
机译:目的:越来越需要在资源有限的环境中进行病毒学监测的简化方法。我们评估了VERSANT(R)HIV-1 RNA(kPCR)测定法对从干血斑(DBS)测定HIV-1病毒载量的性能。评估了测定的灵敏度以及与血浆定量值的相关性。方法:从感染艾滋病毒的患者的新鲜血液中共制备了98个DBS​​。在处理之前,将DBS在室温下保存6周或7个月,同时将相应的血浆样品存储在-80摄氏度。首先将DBS在特殊的DBS缓冲液中进行预处理。然后,使用VERSANT分析试剂纯化和扩增DBS提取物和血浆样品。结果:在储存6周后进行的第一批测试中,血浆和DBS中病毒载量的定量之间具有良好的相关性(r = 0.95,P <0.001)。当血浆水平> 1000拷贝/ mL时,DBS中的检出率为100%。 DBS分析的灵敏度和特异性分别为88.2%[95%置信区间(CI)79.4-93.6]和69.2%(95%CI 42.0-87.4)。使用5000个拷贝/ mL阈值(在资源有限的环境中定义病毒学失败),阳性和阴性预测值均很高(分别为95.2%和87.5%)。保存7个月后,HIV-RNA <5000拷贝/ mL的样品的检出率略有下降,相关性降低。结论:通过VERSANT自动样品制备和检测方法对DBS中的HIV-RNA进行定量可用于诊断HIV阳性患者的病毒学衰竭。

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