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A parallel out-of-core multifrontal method: Storage of factors on disk and analysis of models for an out-of-core active memory

机译:并行的核外多边方法:磁盘上因素的存储和核外活动内存的模型分析

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The memory usage of sparse direct solvers can be the bottleneck to solve large sparse systems of linear equations of the form Ax = b. In order to solve large problems, we have designed a robust out-of-core solver, in which computed factors are stored on disk. We use large real-life problems (up to several million equations and several hundred million nonzeros) to show that we can significantly reduce the core memory usage in parallel (on up to 128 processors), with a time performance comparable to that of a parallel in-core solver. A careful study shows how the low-level I/O mechanisms impact the performance. We describe a low-level I/O layer that avoids the perturbations introduced by system buffers and allows consistently good performance results. To go significantly further in the memory reduction, it is interesting to also store the intermediate working memory on disk. In this paper we describe algorithmic models to address this issue, and study their potential in terms of both memory requirements and I/O volume. The out-of-core solver discussed in this paper is publicly available and already used by several academic and industrial groups. The results of the algorithmic modelling will be the basis to design a new version of this solver; this work may also be a useful reference for other developers of sparse out-of-core solvers.
机译:稀疏直接求解器的内存使用量可能成为解决Ax = b形式的大型线性方程组的稀疏系统的瓶颈。为了解决大问题,我们设计了一个功能强大的核外求解器,其中已计算的因数存储在磁盘上。我们使用大型现实问题(多达数百万个方程式和数亿个非零)来表明,我们可以显着减少并行处理(最多128个处理器)的核心内存使用,其时间性能与并行处理相当核心求解器。仔细的研究显示了底层I / O机制如何影响性能。我们描述了一个低级的I / O层,它避免了系统缓冲区引起的干扰,并始终提供良好的性能结果。为了进一步减少内存,有趣的是还将中间工作内存存储在磁盘上。在本文中,我们描述了用于解决此问题的算法模型,并根据内存需求和I / O量研究了它们的潜力。本文讨论的核心外求解器已公开提供,并且已被多个学术和工业团体使用。算法建模的结果将成为设计此求解器新版本的基础;对于其他稀疏内核外求解器的开发人员来说,这项工作也可能是有用的参考。

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