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Evolution of Hyperactive, Repetitive Antifreeze Proteins in Beetles

机译:甲虫中超活性,重复性抗冻蛋白的进化

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摘要

Some organisms that experience subzero temperatures, such as insects, fish, bacteria, and plants, synthesize antifreeze proteins (AFPs) that adsorb to surfaces of nascent ice crystals and inhibit their growth. Although some AFPs are globular and nonrepetitive, the majority are repetitive in both sequence and structure. In addition, they are frequently encoded by tandemly arrayed, multigene families. AFP isoforms from the mealworm beetle, Tenebrio molitor, are extremely potent and inhibit ice growth at temperatures below ?5°C. They contain a 12-amino acid repeat with the sequence TCTxSxxCxxAx, each of which makes up one coil of the β-helix structure. TxT motifs are arrayed to form the ice-binding surface in all three known insect AFPs: the homologous AFPs from the two beetles, T. molitor and Dendroides canadensis, and the nonhomologous AFP from the spruce budworm, Choristoneura fumiferana. In this study, we have obtained the cDNA and genomic sequences of additional T. molitor isoforms. They show variation in the number of repeats (from 6 to 10) which can largely be explained by recombination at various TCT motifs. In addition, phylogenetic comparison of the AFPs from the two beetles suggests that gene loss and amplification may have occurred after the divergence of these species. In contrast to a previous study suggesting that T. molitor genes have undergone positive Darwinian selection (selection for heterogeneity), we propose that the higher than expected ratio of nonsynonymous-to-synonymous substitutions might result from selection for higher AT content in the third codon position.
机译:某些温度低于零度的生物(例如昆虫,鱼类,细菌和植物)会合成抗冻蛋白(AFP),该蛋白会吸附到新生冰晶的表面并抑制其生长。尽管一些AFP呈球形且不重复,但大多数AFP在序列和结构上都是重复的。此外,它们经常由串联排列的多基因家族编码。来自粉虫甲虫黄粉虫的AFP亚型非常有效,可在低于5°C的温度下抑制冰的生长。它们包含一个12个氨基酸的重复序列TCTxSxxCxxAx,每个重复序列构成一个β-螺旋结构的线圈。在所有三种已知昆虫AFP中排列TxT基序以形成冰结合表面:来自两个甲虫(T. molitor)和加拿大树毛虫(Dendroides canadensis)的同源AFP,以及来自云杉芽虫(Choristoneura fumiferana)的非同源AFP。在这项研究中,我们获得了另外的T. molitor同工型的cDNA和基因组序列。它们显示出重复数的变化(从6到10),这在很大程度上可以由各种TCT基序的重组来解释。此外,从两个甲虫的AFPs的系统发育比较表明,在这些物种分化后可能发生了基因丢失和扩增。与先前的研究表明T. molitor基因已经经历了正向达尔文选择(异质性选择)相反,我们建议,由于选择第三个密码子中较高的AT含量,非同义对同义替换的比率高于预期位置。

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