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Bayesian Hierarchical Multi-Population Multistate Jolly-Seber Models With Covariates: Application to the Pallid Sturgeon Population Assessment Program

机译:具有协变量的贝叶斯层次多人口多状态Jolly-Seber模型:在Pal鱼St鱼种群评估程序中的应用

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摘要

Estimating abundance for multiple populations is of fundamental importance to many ecological monitoring programs. Equally important is quantifying the spatial distribution and characterizing the migratory behavior of target populations within the study domain. To achieve these goals, we propose a Bayesian hierarchical multi-population multistate Jolly-Seber model that incorporates covariates. The model is proposed using a state-space framework and-has several distinct advantages. First, multiple populations within the same study area can be modeled simultaneously. As a consequence, it is possible to achieve improved parameter estimation by "borrowing strength" across different populations. In many cases, such as our motivating example involving endangered species, this borrowing of strength is crucial, as there is relatively less information for one of the populations under consideration. Second, in addition to accommodating covariate information, we develop a computationally efficient Markov chain Monte Carlo algorithm that requires no tuning. Importantly, the model we propose allows us to draw inference on each population as well as on multiple populations simultaneously. Finally, we demonstrate the effectiveness of our method through a motivating example of estimating the spatial distribution and migration of hatchery and wild populations of the endangered pallid sturgeon (Scaphirhynchus albus), using data from the Pallid Sturgeon Population Assessment Program on the Lower Missouri River. Supplementary materials for this article are available online.
机译:估计多个种群的丰度对许多生态监测计划至关重要。同样重要的是量化研究领域内目标人群的空间分布并表征其迁徙行为。为了实现这些目标,我们提出了一个包含协变量的贝叶斯分层多人口多状态Jolly-Seber模型。该模型是使用状态空间框架提出的,具有几个明显的优点。首先,可以同时对同一研究区域内的多个人群进行建模。结果,可以通过跨不同人群的“借用强度”来实现改进的参数估计。在许多情况下,例如我们关于濒危物种的激励性例子,这种力量的借用至关重要,因为对于其中一个正在考虑的种群而言,信息相对较少。其次,除了容纳协变量信息外,我们还开发了一种无需调整的高效计算马尔可夫链蒙特卡罗算法。重要的是,我们提出的模型允许我们同时对每个总体以及多个总体进行推断。最后,我们使用来自密苏里河下游的帕利德St鱼种群评估计划的数据来估算濒临灭绝的苍白lid鱼(Scaphirhynchus albus)的孵化场和野生种群的空间分布和迁移,这是一个有启发性的例子,证明了我们方法的有效性。可在线获得本文的补充材料。

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