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Lung cancer survival period prediction and understanding: Deep learning approaches

机译:肺癌生存期预测与理解:深度学习方法

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Introduction: Survival period prediction through early diagnosis of cancer has many benefits. It allows both patients and caregivers to plan resources, time and intensity of care to provide the best possible treatment path for the patients. In this paper, by focusing on lung cancer patients, we build several survival prediction models using deep learning techniques to tackle both cancer survival classification and regression problems. We also conduct feature importance analysis to understand how lung cancer patients' relevant factors impact their survival periods. We contribute to identifying an approach to estimate survivability that are commonly and practically appropriate for medical use.Methodologies: We have compared the performance across three of the most popular deep learning architectures Artificial Neural Networks (ANN), Convolutional Neural Networks (CNN), and Recurrent Neural Networks (RNN) while comparing the performing of deep learning models against traditional machine learning models. The data was obtained from the lung cancer section of Surveillance, Epidemiology, and End Results (SEER) cancer registry.Results: The deep learning models outperformed traditional machine learning models across both classification and regression approaches. We obtained a best of 71.18 % accuracy for the classification approach when patients' survival periods are segmented into classes of '=6 months',' 0.5 - 2 years' and '2 years' and Root Mean Squared Error (RMSE) of 13.5 % and R-2 value of 0.5 for the regression approach for the deep learning models while the traditional machine learning models saturated at 61.12 % classification accuracy and 14.87 % RMSE in regression.Conclusions: This approach can be a baseline for early prediction with predictions that can be further improved with more temporal treatment information collected from treated patients. In addition, we evaluated the feature importance to investigate the model interpretability, gaining further insight into the survival analysis models and the factors that are important in cancer survival period prediction.
机译:介绍:通过早期诊断癌症的生存期预测具有许多益处。它允许患者和护理人员规划资源,时间和强度,为患者提供最佳的治疗路径。本文通过专注于肺癌患者,我们使用深入学习技术构建了几种生存预测模型,以解决癌症生存分类和回归问题。我们还进行特征重要性分析,以了解肺癌患者的相关因素如何影响其生存期。我们有助于识别估计估计普遍和实际上适用于医疗用途的生存能力的方法。方法:我们已经比较了三个最受欢迎的深度学习架构人工神经网络(ANN),卷积神经网络(CNN)的表现,以及反复性神经网络(RNN),同时比较传统机器学习模型的深度学习模型的表演。这些数据是从监测,流行病学和最终结果(SEER)癌症注册表中的肺癌部分获得。结果:深度学习模型在分类和回归方法中表现出传统的机器学习模型。当患者的生存期被分割成“&lt中6个月”,'0.5-2岁'和'& 2年'和根均方误差时,我们获得了最佳的71.18%的准确性。用于深度学习模型的回归方法的13.5%和R-2值为0.5,而传统的机器学习模型以61.12%的分类精度饱和,回归14.87%的RMSE.Conclusions:这种方法可以是早期预测的基准通过从治疗患者收集的更多时间治疗信息,可以进一步改善预测。此外,我们评估了调查模型可解释性的特征重要性,进一步了解生存分析模型以及在癌症生存期预测中重要的因素。

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