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Molecular characteristic of Pasteurella multocida isolates from Sumba Island at East Nusa Tenggara Province, Indonesia

机译:来自印度尼西亚东部的Sumba Island的Pasteurella Multiocada分离物的分子特征

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Aim: This study aimed to determine the molecular characteristics of Pasteurella multocida isolates originated from Sumba Island, East Nusa Tenggara Province. Materials and Methods: The isolates of P. multocida stored in frozen storage were cultured in blood agar as a selective medium and identified conventionally. Molecular tests were initiated by DNA isolation and then followed by polymerase chain reaction tests with specific primers for the determination of P. multocida serotype A or B. Positive strain of serotype B was then confirmed molecularly using 16S rRNA gene primer and followed by the sequencing of nucleotides. Results: The study showed that both P. multocida isolates from Sumba island, i.e. PM1 is isolated from East Sumba district, while PM2 isolated from West Sumba district have 99.6% homology. Both isolates also known have 99% similarities with P. multocida originated from India, Britain, and Japan, respectively. The isolates share the same clade in the phylogenetic tree. Conclusion: The 16S rRNA sequencing revealed a high similarity of P. multocida serotype B:2 isolated from Sumba island with the Indian isolates although the sample size is very small. Therefore, further molecular studies like multilocus sequence typing, VNTR need to be performed using a larger number of samples to establish the genetic relatedness observed in this study.
机译:目的:本研究旨在确定来自Sumba岛,东努沙腾加拉省Sumba Island的Pasteurella Multiocad株的分子特征。材料和方法:将储存在冷冻储存中的p.多立达的分离物在血琼脂​​中培养为选择性培养基,并常规鉴定。通过DNA分离引发分子试验,然后用具有特异性引物的聚合酶链反应试验,用于测定p.多型血清型A或B.然后使用16S rRNA基因引物进行分子进行分子进行血清型B的阳性菌株,然后进行测序核苷酸。结果:该研究表明,来自Sumba Island的P. Multocida分离株,即PM1是从East Sumba区隔离的,而来自西部Sumba区的PM2有99.6%的同源性。又称的分离物也有99%的相似性,分别来自印度,英国和日本的P. Multocida。隔离物在系统发育树中共享相同的疏水板。结论:16S rRNA测序揭示了P. Multocida Serotype B:2与印度分离物中的Sumba岛分离的高相似性,尽管样品尺寸非常小。因此,需要使用更多数量的样品来进行多层序列键入,VNTR等进一步的分子研究,以建立本研究中观察到的遗传相关性。

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