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Rapid Detection of Viable Salmonellae in Produce by Coupling Propidium Monoazide with Loop-Mediated Isothermal Amplification

机译:单叠氮化丙锭与环介导的等温扩增偶联快速检测生产中的活沙门氏菌

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Recent outbreaks linked to Salmonella -contaminated produce heightened the need to develop simple, rapid, and accurate detection methods, particularly those capable of determining cell viability. In this study, we examined a novel strategy for the rapid detection and quantification of viable salmonellae in produce by coupling a simple propidium monoazide sample treatment with loop-mediated isothermal amplification (PMA-LAMP). We first designed and optimized a LAMP assay targeting Salmonella . Second, the performance of PMA-LAMP for detecting and quantifying viable salmonellae was determined. Finally, the assay was evaluated in experimentally contaminated produce items (cantaloupe, spinach, and tomato). Under the optimized condition, PMA-LAMP consistently gave negative results for heat-killed Salmonella cells with concentrations up to 10~(8) CFU/ml (or CFU/g in produce). The detection limits of PMA-LAMP were 3.4 to 34 viable Salmonella cells in pure culture and 6.1 × 10~(3) to 6.1 × 10~(4) CFU/g in spiked produce samples. In comparison, PMA-PCR was up to 100-fold less sensitive. The correlation between LAMP time threshold ( T_(T) ) values and viable Salmonella cell numbers was high ( R ~(2) = 0.949 to 0.993), with a quantification range (10~(2) to 10~(5) CFU/reaction in pure culture and 10~(4) to 10~(7) CFU/g in produce) comparable to that of PMA in combination with quantitative real-time PCR (PMA-qPCR). The complete PMA-LAMP assay took about 3 h to complete when testing produce samples. In conclusion, this rapid, accurate, and simple method to detect and quantify viable Salmonella cells in produce may present a useful tool for the produce industry to better control potential microbial hazards in produce.
机译:与沙门氏菌污染的病毒有关的近期暴发加剧了对开发简单,快速和准确的检测方法的需求,尤其是那些能够确定细胞活力的检测方法。在这项研究中,我们研究了通过将简单的单叠氮化丙啶样品处理与环介导的等温扩增(PMA-LAMP)偶联,快速检测和定量生产中活沙门氏菌的新策略。我们首先设计和优化了针对沙门氏菌的LAMP分析。其次,确定了PMA-LAMP在检测和定量活沙门氏菌方面的性能。最后,在实验受污染的农产品(哈密瓜,菠菜和番茄)中评估该测定。在最佳条件下,PMA-LAMP对热杀死的沙门氏菌细胞始终产生负面结果,其浓度高达10〜(8)CFU / ml(或产品中的CFU / g)。在纯培养物中,PMA-LAMP的检出限为3.4至34个活沙门氏菌细胞,加标农产品样品中的检出限为6.1×10〜(3)至6.1×10〜(4)CFU / g。相比之下,PMA-PCR的敏感性降低了100倍。 LAMP时间阈值(T_(T))值与沙门氏菌活细胞数之间的相关性很高(R〜(2)= 0.949至0.993),定量范围为(10〜(2)至10〜(5)CFU /与PMA结合定量实时PCR(PMA-qPCR)相比,纯培养物中的反应水平更高,产生的10〜(4)至10〜(7)CFU / g)。测试生产样品时,完整的PMA-LAMP测定需要大约3小时才能完成。总之,这种快速,准确和简单的方法可以检测和定量农产品中的沙门氏菌细胞,为农产品行业更好地控制农产品中的潜在微生物危害提供了有用的工具。

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