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The venom gland transcriptome of the parasitoid wasp Nasonia vitripennis highlights the importance of novel genes in venom function

机译:寄生黄蜂Nasonia vitripennis的毒腺转录组突出了新基因在毒液功能中的重要性

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Background Prior to egg laying the parasitoid wasp Nasonia vitripennis envenomates its pupal host with a complex mixture of venom peptides. This venom induces several dramatic changes in the host, including developmental arrest, immunosuppression, and altered metabolism. The diverse and potent bioactivity of N. vitripennis venom provides opportunities for the development of novel acting pharmaceuticals based on these molecules. However, currently very little is known about the specific functions of individual venom peptides or what mechanisms underlie the hosts response to envenomation. Many of the venom peptides also lack bioinformatically derived annotations because no homologs can be identified in the sequences databases. The RNA interference system of N. vitripennis provides a method for functional characterisation of venom protein encoding genes, however working with the current list of 79 candidates represents a daunting task. For this reason we were interested in determining the expression levels of venom encoding genes in the venom gland, as this information could be used to rank candidates for further study. To do this we carried out deep transcriptome sequencing of the venom gland and ovary tissue and used RNA-seq to rank the venom protein encoding genes by expression level. The generation of a specific venom gland transcriptome dataset also provides further opportunities to investigate novel features of this specialised organ. Results RNA-seq revealed that the highest expressed venom encoding gene in the venom gland was ‘Venom protein Y’. The highest expressed annotated gene in this tissue was serine protease Nasvi2EG007167 , which has previously been implicated in the apoptotic activity of N. vitripennis venom. As expected the RNA-seq confirmed that venom encoding genes are almost exclusively expressed in the venom gland relative to the neighbouring ovary tissue. Novel genes appear to perform key roles in N. vitripennis venom function, with over half of the 15 highest expressed venom encoding loci lacking bioinformatic annotations. The high throughput sequencing data also provided evidence for the existence of an additional 472 previously undescribed transcribed regions in the N. vitripennis genome. Finally, metatranscriptomic analysis of the venom gland transcriptome finds little evidence for the role of Wolbachia in the venom system. Conclusions The expression level information provided here for the N. vitripennis venom protein encoding genes represents a valuable dataset that can be used by the research community to rank candidates for further functional characterisation. These candidates represent bioactive peptides valuable in the development of new pharmaceuticals.
机译:背景技术在产卵前,寄生类黄蜂Nasonia vitripennis用复杂的毒液肽混合物将其mixture宿主毒化。该毒液在宿主中引起若干戏剧性变化,包括发育停滞,免疫抑制和代谢改变。曲霉猪笼草毒液的多样而有效的生物活性为开发基于这些分子的新型药物提供了机会。但是,目前对单个毒液肽的特定功能或宿主对毒液反应的基础机制了解甚少。许多毒液肽也缺少生物信息学衍生的注释,因为在序列数据库中无法鉴定出同源物。曲霉猪笼草的RNA干扰系统提供了一种功能特征,对蛇毒蛋白编码基因进行功能表征,但是要与当前的79种候选基因结合使用,是一项艰巨的任务。出于这个原因,我们对确定毒液腺中毒液编码基因的表达水平感兴趣,因为该信息可用于对候选者进行进一步研究。为此,我们对蛇毒腺和卵巢组织进行了深度转录组测序,并使用RNA-seq通过表达水平对蛇毒蛋白编码基因进行了排名。特定毒腺转录组数据集的产生也提供了进一步的机会来研究该专门器官的新颖特征。结果RNA序列显示,在毒液腺中表达最高的毒液编码基因是“毒液蛋白Y”。在该组织中表达最高的带注释基因是丝氨酸蛋白酶Nasvi2EG007167,该酶先前已被证明与玻璃态猪笼草毒液的凋亡活性有关。如预期的那样,RNA-seq证实了毒液编码基因相对于邻近卵巢组织几乎完全在毒液腺中表达。新的基因似乎在葡萄膜猪笼草的毒液功能中起关键作用,在15个表达最高的毒液编码基因座中,超过一半缺乏生物信息学注释。高通量测序数据还提供了证据,证明在玻璃猪笼草基因组中存在另外472个先前未描述的转录区域。最后,对蛇毒腺转录组的转录组学分析发现沃尔巴赫菌在毒液系统中的作用的证据很少。结论此处提供的有关N. vitripennis毒液蛋白编码基因的表达水平信息代表了一个有价值的数据集,研究团体可以使用该数据集来对候选蛋白进行进一步的功能表征。这些候选物代表了在新药物开发中有价值的生物活性肽。

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