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首页> 外文期刊>Journal of Thoracic Disease >Matrix-assisted laser desorption ionization time-of-flight mass spectrometry: a powerful tool for identification of Corynebacterium species
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Matrix-assisted laser desorption ionization time-of-flight mass spectrometry: a powerful tool for identification of Corynebacterium species

机译:基质辅助激光解吸电离飞行时间质谱:鉴定棒状杆菌种的有力工具

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Background: Matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) is a powerful tool that has initiated a revolution in the clinical microbiology laboratory for identification of nosocomial pathogens. The efficacy of MALDI-TOF MS produced by bioMerieux, Marcy l’Etoile, France (VITEK MS) for detecting Corynebacterium remains unknown. Methods: Corynebacterium isolates were isolated from clinical specimen in a tertial teaching hospital from 2012 to 2013. All strains confirmed by rpoB sequencing were identified by API Coryne (bioMerieux), Phoenix (BD) and VITEK MS, respectively. The coincidence rate was used to evaluate the consistency and accuracy across three methods. Results: In all, 75 Corynebacterium isolates were collected in this study. The dominant isolates were Corynebacterium striatum (58.7%), Corynebacterium jeikeium (16.0%), Corynebacterium amycolatum (5.3%), Corynebacterium urealyticum (5.3%), Corynebacterium glucuronolyticum (2.7%) and Corynebacterium minutissimum (2.7%). We found that there was no significant difference in the identification of corynebacterium to genus level by MS (100%, 75/75) or Phoenix (93.3%, 70/75) (P=0.058). However, 92.0% (69/75) strains were successfully identified to species by MS while which by Phoenix and API was 78.7% and 65.3% respectively. Compared with gene sequencing, the coincidence rate of identification by MS was significantly higher than Phoenix (P=0.036) and API (P Conclusions: VITEK MS was a powerful tool, which could be applied in clinical laboratory, improving the diagnosis for Corynebacterium infection.
机译:背景:基质辅助激光解吸电离飞行时间质谱(MALDI-TOF MS)是一种功能强大的工具,已在临床微生物学实验室引发了一场用于鉴定医院病原体的革命。法国marcy l'Etoile的bioMerieux生产的MALDI-TOF MS(VITEK MS)检测棒状杆菌的功效仍未知。方法:2012年至2013年从三级教学医院的临床标本中分离出棒状杆菌。通过rpoB测序确认的所有菌株分别通过API Coryne(bioMerieux),Phoenix(BD)和VITEK MS进行鉴定。符合率用于评估三种方法的一致性和准确性。结果:本研究共收集了75株棒状杆菌。占优势的分离株是纹状棒状杆菌(58.7%),短杆菌棒状杆菌(16.0%),淀粉棒状杆菌(5.3%),解脲棒状杆菌(5.3%),葡萄糖醛酸棒状杆菌(2.7%)和细小棒状杆菌(2.7%)。我们发现通过MS(100%,75/75)或Phoenix(93.3%,70/75)鉴定棒状杆菌至属水平没有显着差异(P = 0.058)。然而,通过MS成功鉴定出92.0%(69/75)菌株,而Phoenix和API分别为78.7%和65.3%。与基因测序相比,质谱鉴定的符合率显着高于Phoenix(P = 0.036)和API(P结论):VITEK MS是一种功能强大的工具,可在临床实验室中应用,从而改善棒状杆菌感染的诊断。

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