首页> 外文期刊>Frontiers in Neuroscience >Targeted Re-Sequencing Approach of Candidate Genes Implicates Rare Potentially Functional Variants in Tourette Syndrome Etiology
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Targeted Re-Sequencing Approach of Candidate Genes Implicates Rare Potentially Functional Variants in Tourette Syndrome Etiology

机译:候选基因的靶向重测序方法在抽动秽语综合征病因中涉及罕见的潜在功能变异

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Although the genetic basis of Tourette Syndrome (TS) remains unclear, several candidate genes have been implicated. Using a set of 382 TS individuals of European ancestry we investigated four candidate genes for TS ( HDC, SLITRK1, BTBD9 , and SLC6A4 ) in an effort to identify possibly causal variants using a targeted re-sequencing approach by next generation sequencing technology. Identification of possible disease causing variants under different modes of inheritance was performed using the algorithms implemented in VAAST. We prioritized variants using Variant ranker and validated five rare variants via Sanger sequencing in HDC and SLITRK1 , all of which are predicted to be deleterious. Intriguingly, one of the identified variants is in linkage disequilibrium with a variant that is included among the top hits of a genome-wide association study for response to citalopram treatment, an antidepressant drug with off-label use also in obsessive compulsive disorder. Our findings provide additional evidence for the implication of these two genes in TS susceptibility and the possible role of these proteins in the pathobiology of TS should be revisited.
机译:尽管抽动秽语综合征(TS)的遗传基础尚不清楚,但已牵涉到一些候选基因。我们使用一组382个欧洲血统的TS个体,研究了TS的四个候选基因(HDC,SLITRK1,BTBD9和SLC6A4),以通过下一代测序技术使用靶向重测序方法来鉴定可能的因果变体。使用VAAST中实施的算法,对不同遗传模式下可能引起疾病的变异进行了鉴定。我们使用Variant排序器对变体进行了优先排序,并通过HDC和SLITRK1中的Sanger测序验证了五个稀有变体,所有这些变体都被认为是有害的。有趣的是,已鉴定出的变异体之一是与一个变异体连锁不平衡,该变异体包括在全基因组关联研究中,对西酞普兰治疗有反应。该药物是一种抗抑郁药,在强迫症中也可在标签外使用。我们的发现为这两个基因对TS的易感性提供了进一步的证据,这些蛋白在TS的病理生物学中的可能作用应予以重新研究。

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