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Real-time forecasting of infectious disease dynamics with a stochastic semi-mechanistic model

机译:随机半力学模型实时预测传染病动态

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Real-time forecasts of infectious diseases can help public health planning, especially during outbreaks. If forecasts are generated from mechanistic models, they can be further used to target resources or to compare the impact of possible interventions. However, paremeterising such models is often difficult in real time, when information on behavioural changes, interventions and routes of transmission are not readily available. Here, we present a semi-mechanistic model of infectious disease dynamics that was used in real time during the 2013–2016 West African Ebola epidemic, and show fits to a Ebola Forecasting Challenge conducted in late 2015 with simulated data mimicking the true epidemic. We assess the performance of the model in different situations and identify strengths and shortcomings of our approach. Models such as the one presented here which combine the power of mechanistic models with the flexibility to include uncertainty about the precise outbreak dynamics may be an important tool in combating future outbreaks.
机译:传染病的实时预测可以帮助公共卫生规划,尤其是在暴发期间。如果预测是通过机械模型生成的,则可以将其进一步用作目标资源或比较可能干预的影响。但是,当关于行为变化,干预措施和传播途径的信息不易获得时,对这种模型进行参数化通常很难实时进行。在这里,我们介绍了传染病动态的半机械模型,该模型在2013-2016年西非埃博拉疫情中实时使用,并显示出与2015年底进行的埃博拉疫情预测挑战相吻合,模拟数据模拟了真实的流行病。我们评估模型在不同情况下的性能,并确定我们方法的优点和缺点。像此处介绍的模型那样,将机械模型的功能与灵活性相结合,可以包括有关精确爆发动态的不确定性,这些模型可能是应对未来爆发的重要工具。

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