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Japan Astrobiology Mars Project (JAMP): Search for Microbes on The Mars Surface with Special Interest in Methane-Oxidizing Bacteria

机译:日本天体生物学火星计划(JAMP):在火星表面搜寻对甲烷氧化细菌特别感兴趣的微生物

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Liquid water is considered to be critical for life. Gibbs free energy is another factor that is important to sustain life for long durations. Gibbs free energy is obtained by reactions between reductants and oxidants, or from any other non-equilibrium state of matter. As an example, aerobic organisms use carbohydrates and oxygen to obtain energy. Many types of chemoautotrophic mechanisms are known for this process as well. On the surface of Mars, methane and oxidative compounds such as ferric oxide, sulfate and perchloride, which could provide redox-derived Gibbs free energy, have been detected. Iron-dependent methane oxidizing bacteria have been found in marine environments on Earth. This finding suggests the possible presence of methane-oxidizing bacteria on the Mars surface, if the local thermal environment and other resources permit proliferation and metabolism of bacteria. Our project aims to search for methane-oxidizing microbes on the Mars surface. Martian soil will be sampled from a depth of about 5 - 10 cm below the surface, where organisms are expected to be protected from the harsh hyper-oxidative environment of the Mars surface. Small particles less than 0.1 mm or 1 mm will be sieved from the sample, before being transferred to the analysis section by a micro-actuator. The particles will be stained with a cocktail of fluorescent reagents, and examined by fluorescence microscopy. A combination of fluorescent dyes has been selected to identify life forms in samples. A membrane-specific dye or a combination of dyes will be used to detect membranes surrounding the "cell". An intercalating fluorescent dye such as SYBR Green will be used to detect genetic compounds such as DNA. A substrate dye that emits fluorescence upon cleavage by a catalytic reaction will be used to detect the catalytic activity of the "cell". A combination of staining reagents has been chosen based on the definition of life. A membrane separating a cell from the ambient environment may lead to identification of an "individual". DNA or genetic material is required for "replication" of the life form. Catalytic reactions carried out by enzymes drive "metabolism". This combination of strategies will also be useful for detecting pre-biotic organic material as well as remnants of ancient life. Hydrolysis of the polymers in the "cell" followed by HPLC or soft ionization MS for amino acid analysis will be effective for examining whether Martian life is identical to or different from terrestrial life. The number and type of the amino acids as well as their chirality will be analyzed to distinguish whether the polymers are contaminants from Earth.
机译:液态水被认为对生命至关重要。吉布斯自由能是另一个因素,对于长时间维持生命很重要。吉布斯自由能通过还原剂与氧化剂之间的反应或从任何其他非平衡态获得。例如,有氧生物利用碳水化合物和氧气来获取能量。也已知许多类型的化学自养机制。在火星表面,已检测到甲烷和氧化性化合物(如三氧化二铁,硫酸盐和高氯酸盐),它们可以提供氧化还原衍生的吉布斯自由能。在地球的海洋环境中发现了铁依赖性甲烷氧化细菌。这一发现表明,如果当地的热环境和其他资源允许细菌繁殖和代谢,那么在火星表面可能存在甲烷氧化细菌。我们的项目旨在在火星表面寻找甲烷氧化微生物。将从火星表面以下约5-10 cm的深度取样火星土壤,预计将保护生物免受火星表面恶劣的高氧化环境的侵害。从样品中筛出小于0.1毫米或1毫米的小颗粒,然后再通过微执行器将其转移到分析部分。颗粒将用荧光试剂混合物染色,并通过荧光显微镜检查。已选择荧光染料的组合来鉴定样品中的生命形式。膜特异性染料或染料的组合将用于检测“细胞”周围的膜。插入荧光染料(例如SYBR Green)将用于检测遗传化合物(例如DNA)。通过催化反应裂解后发出荧光的底物染料将用于检测“细胞”的催化活性。根据寿命的定义选择了染色剂的组合。将细胞与周围环境分开的膜可能导致“个体”的识别。 DNA或遗传物质是生命形式“复制”所必需的。酶进行的催化反应驱动“新陈代谢”。这些策略的组合还将对检测益生元有机物质以及古代生命的残留物有用。水解“池”中的聚合物,然后进行HPLC或软电离MS进行氨基酸分析,对于检查火星生命是否与陆地生命相同或不同将是有效的。将分析氨基酸的数量和类型以及它们的手性,以区分聚合物是否是来自地球的污染物。

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