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A comparison of metrics and performance characteristics of different search strategies for article retrieval for a systematic review of the global epidemiology of kidney and urinary diseases

机译:比较文章检索的不同搜索策略的指标和性能特征,以系统回顾全球肾脏和泌尿系统疾病流行病学

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Conducting a systematic review requires a comprehensive bibliographic search. Comparing different search strategies is essential for choosing those that cover all useful data sources. Our aim was to develop search strategies for article retrieval for a systematic review of the global epidemiology of kidney and urinary diseases, and evaluate their metrics and performance characteristics that could be useful for other systematic epidemiologic reviews. We described the methodological framework and analysed approaches applied in the previously conducted systematic review intended to obtain published data for global estimates of the kidney and urinary disease burden. We used several search strategies in PubMed and EMBASE, and compared several metrics: number needed to retrieve (NNR), number of extracted data rows, number of covered countries, and when appropriate, sensitivity, specificity, precision, and accuracy. The initial search obtained 29,460 records from PubMed, and 4247 from EMBASE. After the revision, the full text of 381 and 14 articles respectively was obtained for data extraction (the percentage of useful records is 1.3% for PubMed, 0.3% for EMBASE). For PubMed we developed two search strategies and compared them with a ‘gold standard’ formed by merging their results: free word search strategy (FreeWoSS) was based on the search for keywords in all fields, and subject headings based search strategy (SuHeSS) used only MeSH-mapped conditions and countries names. SuHeSS excluded almost 15% of useful articles and data rows extracted from them, but had a lower NNR of 40 and higher specificity. FreeWoSS had better sensitivity and was able to cover the vast majority of articles and extracted data rows, but had a higher NNR of 65. The sensitive FreeWoSS strategy provides more data for modelling, while the more specific SuHeSS strategy could be used when resources are limited. EMBASE has limited value for our systematic review.
机译:进行系统的审查需要全面的书目搜索。比较不同的搜索策略对于选择覆盖所有有用数据源的搜索策略至关重要。我们的目标是为文章检索开发搜索策略,以对全球肾脏和泌尿系统疾病的流行病学进行系统的综述,并评估它们的指标和性能特征,这些指标和功能特征可能对其他系统的流行病学综述有用。我们描述了在先前进行的系统评价中应用的方法框架和分析方法,旨在获取已发布的数据,以全面估算肾脏和泌尿系统疾病的负担。我们在PubMed和EMBASE中使用了几种搜索策略,并比较了几种指标:检索所需的数量(NNR),提取的数据行的数量,所覆盖国家的数量,以及在适当的情况下的敏感性,特异性,准确性和准确性。初始搜索从PubMed获得了29,460条记录,从EMBASE获得了4247条记录。修订后,分别获得了381条和14条文章的全文以进行数据提取(PubMed的有用记录百分比为1.3%,EMBASE的有用记录百分比为0.3%)。对于PubMed,我们开发了两种搜索策略,并将它们与通过合并其结果而形成的“黄金标准”进行了比较:自由词搜索策略(FreeWoSS)基于所有领域中的关键字搜索,而基于主题词的搜索策略(SuHeSS)仅MeSH映射的条件和国家/地区名称。 SuHeSS排除了将近15%的有用文章和从中提取的数据行,但NNR较低,为40,特异性更高。 FreeWoSS的敏感性更高,能够覆盖绝大多数文章和提取的数据行,但NNR更高,为65。敏感的FreeWoSS策略提供了更多的数据进行建模,而在资源有限的情况下可以使用更具体的SuHeSS策略。 。 EMBASE对于我们的系统审查具有有限的价值。

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