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Comparison of CHARMM and OPLS-aa forcefield predictions for components in one model asphalt mixture

机译:一种沥青混合料中CHARMM和OPLS-aa力场预测的比较

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Molecular dynamics simulations have been widely applied to understand the effect of chemical composition on the major physical and mechanical properties and micro-structure of asphalt. However, the choice of forcefields has been mostly empirical. in this project, two commonly used forcefields, the Chemistry at Harvard Macromolecular Mechanics (CHARMM) forcefield and the Optimized Potentials for Liquid Simulations in all atom version (OPLS-aa) forcefield were evaluated, side by side for simulation of the three main components of one model asphalt mixture to compare the effectiveness of the forcefields. The CHARMM forcefield parameters for two smaller components including n-docosane and 1,7-dimethylnaphthalene molecules were obtained using the CGENFF program; the forcefield parameters for an average asphaltene molecule were obtained with the VMD forcefield toolkit and Gaussian quantum calculations. Comparing molecule structures of asphaltene, 1,7-dimethylnaphthalene and n-docosane (n-C-22) predicted using the CHARMM forcefield to those from traditional OPLS-aa forcefield, the energy-minimized structures are very similar. At a high temperature such as 300 K and above, slight bending on the aromatic ring regions and the alkane chains was observed for the asphaltene molecule; kinking of the n-docosane molecule chain structure was also observed using both forcefields; and the structure of 1,7-dimethylnaphthalene is consistent at both low and high temperatures. Comparing the properties predicted based on the long-term simulation trajectories, the density, diffusion coefficient and g(r) result of asphaltene, 1,7-dimethylnaphthalene and n-docosane from the CHARMM and Nanoscale Molecular Dynamics (NAMD) program are very close to those from the OPLS-aa forcefield and LAMMPS program. However, the CHARMM forcefield correctly predicted the crystallization of n-docosane at 300 K while the OPLS-aa forcefield did not. (C) 2019 Elsevier Ltd. All rights reserved.
机译:分子动力学模拟已广泛应用于理解化学组成对沥青主要物理机械性能和微观结构的影响。但是,对力场的选择主要是凭经验。在该项目中,评估了两个常用的力场,即哈佛大分子化学(CHARMM)力场和所有原子版本(OPLS-aa)力场的液体模拟优化势,并排进行了仿真,以模拟一种模型沥青混合料,以比较力场的有效性。使用CGENFF程序获得了两个较小组分(包括正二十二烷和1,7-二甲基萘分子)的CHARMM力场参数;使用VMD力场工具包和高斯量子计算获得了平均沥青质分子的力场参数。将使用CHARMM力场预测的沥青质,1,7-二甲基萘和正二十二烷(n-C-22)的分子结构与传统OPLS-aa力场中的分子结构进行比较,能量最小化的结构非常相似。在300 K以上的高温下,沥青质分子在芳香环区域和烷烃链上出现轻微弯曲;使用两个力场也观察到正二十二烷分子链结构的扭结。 1,7-二甲基萘的结构在低温和高温下均保持一致。根据长期模拟轨迹预测的性能进行比较,CHARMM和纳米级分子动力学(NAMD)程序中的沥青质,1,7-二甲基萘和正二十二烷的密度,扩散系数和g(r)结果非常接近来自OPLS-aa力场和LAMMPS程序的那些。但是,CHARMM力场正确地预测了300 K下正二十二烷的结晶,而OPLS-aa力场却没有。 (C)2019 Elsevier Ltd.保留所有权利。

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