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Real-time estimation of biomass and specific growth rate in physiologically variable recombinant fed-batch processes

机译:生理可变的重组分批补料过程中生物量和比增长率的实时估计

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摘要

The real-time measurement of biomass has been addressed since many years. The quantification of biomass in the induction phase of a recombinant bioprocess is not straight forward, since biological burden, caused by protein expression, can have a significant impact on the cell morphology and physiology. This variability potentially leads to poor generalization of the biomass estimation, hence is a very important issue in the dynamic field of process development with frequently changing processes and producer lines. We want to present a method to quantify "biomass" in real-time which avoids off-line sampling and the need for representative training data sets. This generally applicable soft-sensor, based on first principles, was used for the quantification of biomass in induced recombinant fed-batch processes. Results were compared with "state of the art" methods to estimate the biomass concentration and the specific growth rate μ. Gross errors such as wrong stoichiometric assumptions or sensor failure were detected automatically. This method allows for variable model coefficients such as yields in contrast to other process models, hence does not require prior experiments. It can be easily adapted to a different growth stoichiometry; hence the method provides good generalization, also for induced culture mode. This approach estimates the biomass (or anabolic bioconversion) in induced fed-batch cultures in real-time and provides this key variable for process development for control purposes.
机译:多年来,生物量的实时测量已得到解决。重组生物过程的诱导阶段中生物量的量化不是直接的,因为由蛋白质表达引起的生物负担可能对细胞的形态和生理产生重大影响。这种可变性可能导致对生物量估计的概括性较差,因此在过程开发和生产线频繁变化的动态过程开发领域中,这是一个非常重要的问题。我们想提出一种实时量化“生物量”的方法,它可以避免离线采样以及需要有代表性的训练数据集。基于第一原理,这种通常适用的软传感器用于量化诱导的重组补料分批过程中的生物量。将结果与“最新技术”方法进行比较,以估算生物质浓度和比生长率μ。系统会自动检测到诸如化学计量假设错误或传感器故障之类的重大错误。与其他过程模型相比,此方法允许使用可变模型系数(例如产量),因此不需要先验。它可以很容易地适应不同的生长化学计量。因此,该方法也为诱导培养模式提供了良好的概括。该方法实时估计诱导的分批补料培养中的生物量(或同化生物转化),并为控制目的为工艺开发提供此关键变量。

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