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Static self-directed sample dispensing into a series of reaction wells on a microfluidic card for parallel genetic detection of microbial pathogens

机译:静态自定向样品分配到微流卡上的一系列反应孔中用于微生物病原体的并行遗传检测

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摘要

A microfluidic card is described for simultaneous and rapid genetic detection of multiple microbial pathogens. The hydrophobic surface of native acrylic and a novel microfluidic mechanism termed “airlock” were used to dispense sample into a series of 64 reaction wells without the use of valves, external pumping peripherals, multiple layers, or vacuum assistance. This airlock mechanism was tested with dilutions of whole human blood, saliva, and urine, along with mock samples of varying viscosities and surface tensions. Samples spiked with genomic DNA (gDNA) or crude lysates from clinical bacterial isolates were tested with loop mediated isothermal amplification assays (LAMP) designed to target virulence and antibiotic resistance genes. Reactions were monitored in real time using the Gene-Z, which is a portable smartphone-driven system. Samples loaded correctly into the microfluidic card in 99.3 % of instances. Amplification results confirmed no carryover of pre-dispensed primer between wells during sample loading, and no observable diffusion between adjacent wells during the 60 to 90 min isothermal reaction. Sensitivity was comparable between LAMP reactions tested within the microfluidic card and in conventional vials. Tests demonstrate that the airlock card works with various sample types, manufacturing techniques, and can potentially be used in many point-of-care diagnostics applications.Electronic supplementary materialThe online version of this article (doi:10.1007/s10544-015-9994-1) contains supplementary material, which is available to authorized users.
机译:描述了一种用于同时且快速遗传检测多种微生物病原体的微流控卡。天然丙烯酸的疏水表面和称为“气锁”的新型微流体机理被用于将样品分配到一系列64个反应孔中,而无需使用阀门,外部泵送外围设备,多层或真空辅助。用全人类血液,唾液和尿液的稀释液以及不同粘度和表面张力的模拟样品测试了这种气闸机理。使用设计用于靶向毒力和抗生素抗性基因的环介导的等温扩增测定(LAMP),对掺有基因组DNA(gDNA)或临床细菌分离物的粗裂解物的样品进行了测试。使用便携式智能手机驱动的Gene-Z实时监测反应。在99.3%的实例中,样品已正确加载到微流卡中。扩增结果证实在样品上样过程中,孔之间没有预先分配的引物残留,在60至90分钟的等温反应过程中,相邻孔之间没有可观察到的扩散。在微流控卡和常规样品瓶中测试的LAMP反应之间的灵敏度可比。测试表明,气闸卡可以使用各种样品类型,制造技术,并且可以潜在地用于许多即时诊断服务。电子补充材料本文的在线版本(doi:10.1007 / s10544-015-9994-1 )包含补充材料,授权用户可以使用。

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