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Non-target time trend screening: a data reduction strategy for detecting emerging contaminants in biological samples

机译:非目标时间趋势筛选:一种用于检测生物样品中新兴污染物的数据缩减策略

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摘要

Non-targeted mass spectrometry-based approaches for detecting novel xenobiotics in biological samples are hampered by the occurrence of naturally fluctuating endogenous substances, which are difficult to distinguish from environmental contaminants. Here, we investigate a data reduction strategy for datasets derived from a biological time series. The objective is to flag reoccurring peaks in the time series based on increasing peak intensities, thereby reducing peak lists to only those which may be associated with emerging bioaccumulative contaminants. As a result, compounds with increasing concentrations are flagged while compounds displaying random, decreasing, or steady-state time trends are removed. As an initial proof of concept, we created artificial time trends by fortifying human whole blood samples with isotopically labelled standards. Different scenarios were investigated: eight model compounds had a continuously increasing trend in the last two to nine time points, and four model compounds had a trend that reached steady state after an initial increase. Each time series was investigated at three fortification levels and one unfortified series. Following extraction, analysis by ultra performance liquid chromatography high-resolution mass spectrometry, and data processing, a total of 21,700 aligned peaks were obtained. Peaks displaying an increasing trend were filtered from randomly fluctuating peaks using time trend ratios and Spearman’s rank correlation coefficients. The first approach was successful in flagging model compounds spiked at only two to three time points, while the latter approach resulted in all model compounds ranking in the top 11 % of the peak lists. Compared to initial peak lists, a combination of both approaches reduced the size of datasets by 80–85 %. Overall, non-target time trend screening represents a promising data reduction strategy for identifying emerging bioaccumulative contaminants in biological samples.>Graphical abstractUsing time trends to filter out emerging contaminants from large peak lists
机译:天然波动的内源性物质的存在阻碍了用于检测生物样品中新型异源物质的基于非目标质谱的方法,这种方法很难与环境污染物区分开。在这里,我们研究了从生物学时间序列得出的数据集的数据缩减策略。目的是根据增加的峰强度来标记时间序列中的重复出现的峰,从而将峰列表减少到仅与可能出现的生物累积污染物相关的峰列表。结果,标记了浓度增加的化合物,同时去除了显示随机,减少或稳态时间趋势的化合物。作为概念的初步证明,我们通过用同位素标记的标准品强化人类全血样本来创建人工时间趋势。研究了不同的情况:八个模型化合物在最近两到九个时间点具有连续增加的趋势,并且四个模型化合物具有在初始增加后达到稳态的趋势。每个时间序列在三个设防级别和一个未强化级别进行了调查。提取后,通过超高效液相色谱高分辨率质谱分析和数据处理,总共获得21,700个对准的峰。使用时间趋势比率和Spearman的秩相关系数,从随机波动的峰中过滤出显示出上升趋势的峰。第一种方法成功地标记了仅在两到三个时间点加标的模型化合物,而后一种方法导致所有模型化合物均位于峰列表的前11%。与初始峰列表相比,两种方法的组合将数据集的大小减少了80–85%。总的来说,非目标时间趋势筛选代表了一种有前途的数据缩减策略,可用于识别生物样品中正在出现的生物累积污染物。<!-fig ft0-> <!-fig @ position =“ anchor” mode = article f4-> <!-fig mode =“ anchored” f5-> >图形摘要<!-fig / graphic | fig / alternatives / graphic mode =“ anchored” m1-> <!-标题a7->利用时间趋势从大峰列表中过滤掉新兴污染物

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