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Gene duplication and relaxation from selective constraints of GCYC genes correlated with various floral symmetry patterns in Asiatic Gesneriaceae tribe Trichosporeae

机译:GCYC基因选择性限制的基因复制和松弛与亚洲Gesneriaceae部落Trichosporeae的各种花卉对称性模式相关

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摘要

Floral bilateral symmetry is one of the most important acquisitions in flower shape evolution in angiosperms. Members of Gesneriaceae possess predominantly zygomorphic flowers yet natural reversal to actinomorphy have independently evolved multiple times. The development of floral bilateral symmetry relies greatly on the gene CYCLOIDEA (CYC). Our reconstructed GCYC phylogeny indicated at least five GCYC duplication events occurred over the evolutionary history of Gesneriaceae. However, the patterns of GCYC expression following the duplications and the role of natural selection on GCYC copies in relation to floral symmetry remained largely unstudied. The Asiatic tribe Trichosporeae contains most reversals to actinomorphy. We thus investigated shifts in GCYC gene expression among selected zygomorphic species (Hemiboea bicornuta and Lysionotus pauciflorus) and species with reversals to actinomorphy (Conandron ramondioides) by RT-PCR. In the actinomorphic C. ramondioides, none of the three copies of GCYC was found expressed in petals implying that the reversal was a loss-of-function event. On the other hand, both zygomorphic species retained one GCYC1 copy that was expressed in the dorsal petals but each species utilized a different copy (GCYC1C for H. bicornuta and GCYC1D for L. pauciflorus). Together with previously published data, it appeared that GCYC1C and GCYC1D copies diversified their expression in a distinct species-specific pattern. To detect whether the selection signal (ω) changed before and after the duplication of GCYC1 in Asiatic Trichosporeae, we reconstructed a GCYC phylogeny using maximum likelihood and Bayesian inference algorithms and examined selection signals using PAML. The PAML analysis detected relaxation from selection right after the GCYC1 duplication (ωpre-duplication = 0.2819, ωpost-duplication = 0.3985) among Asiatic Trichosporeae species. We propose that the selection relaxation after the GCYC1 duplication created an "evolutionary window of flexibility" in which multiple copies were retained with randomly diverged roles for dorsal-specific expressions in association with floral symmetry changes.
机译:花的双边对称性是被子植物花形进化中最重要的要素之一。苦苣苔科的成员主要具有合子花,但自然逆转为光化子花已独立进化了多次。花的双边对称性的发展很大程度上依赖于基因CYCLOIDEA(CYC)。我们重建的GCYC系统发育表明,在Gesneriaceae的进化史中至少发生了5次GCYC复制事件。然而,重复研究后的GCYC表达模式和自然选择在GCYC拷贝上的作用与花的对称性之间的关系仍未被研究。亚洲部落的孢子虫科有许多逆转的光化形态。因此,我们通过RT-PCR研究了GCYC基因表达在选定的合型物种(Hemiboea bicornuta和Lysionotus pauciflorus)以及具有逆转至光化形态(Conandron ramondioides)的物种之间的变化。在放线型的雷氏梭状芽孢杆菌中,未发现在花瓣中表达了GCYC的三个拷贝,这暗示逆转是功能丧失事件。另一方面,这两个同型物种保留了一个在背花瓣中表达的GCYC1拷贝,但每个物种都使用了一个不同的拷贝(H. bicornuta GCYC1D em> L pauciflorus )。连同以前发表的数据,看来 GCYC1C GCYC1D 拷贝以不同的物种特异性模式使它们的表达多样化。为了检测在亚洲毛孢菌科中 GCYC1 重复之前和之后选择信号(ω)是否发生变化,我们使用最大似然和贝叶斯推断算法重建了 GCYC 系统发育,并研究了选择PAML发出信号。 PAML分析检测到亚洲毛孢菌科动物在 GCYC1 重复后(ωpre-duplication= 0.2819,ωpost-duplication= 0.3985)选择后就放松了。我们建议,在 GCYC1 复制后的选择放松创造了一个“灵活性的进化窗口”,其中保留了多个副本,这些副本具有随机散布的背侧特异性表达与花对称性相关的角色。

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