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Epoxide hydrolysis as a model system for understanding flux through a branched reaction scheme

机译:环氧水解作为模型系统可通过分支反应方案了解通量

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摘要

The epoxide hydrolase StEH1 catalyzes the hydrolysis of trans-methylstyrene oxide to 1-phenyl­propane-1,2-diol. The (S,S)-epoxide is exclusively transformed into the (1R,2S)-diol, while hydrolysis of the (R,R)-epoxide results in a mixture of product enantiomers. In order to understand the differences in the stereoconfigurations of the products, the reactions were studied kinetically during both the pre-steady-state and steady-state phases. A number of closely related StEH1 variants were analyzed in parallel, and the results were rationalized by structure–activity analysis using the available crystal structures of all tested enzyme variants. Finally, empirical valence-bond simulations were performed in order to provide additional insight into the observed kinetic behaviour and ratios of the diol product enantiomers. These combined data allow us to present a model for the flux through the catalyzed reactions. With the (R,R)-epoxide, ring opening may occur at either C atom and with similar energy barriers for hydrolysis, resulting in a mixture of diol enantiomer products. However, with the (S,S)-epoxide, although either epoxide C atom may react to form the covalent enzyme intermediate, only the pro-(R,S) alkylenzyme is amenable to subsequent hydrolysis. Previously contradictory observations from kinetics experiments as well as product ratios can therefore now be explained for this biocatalytically relevant enzyme.
机译:环氧化物水解酶StEH1催化反式甲基苯乙烯氧化物水解为1-苯基­丙烷-1,2-二醇。 (S,S)-环氧化物仅转化为(1R,2S)-二醇,而(R,R)-环氧化物的水解产生产物对映异构体的混合物。为了理解产物的立体构型的差异,在稳态之前和稳态阶段都进行了动力学研究。并行分析了许多紧密相关的StEH1变体,并使用所有测试的酶变体的可用晶体结构,通过结构活性分析使结果合理化。最后,进行了经验价键模拟,以提供对观察到的动力学行为和二醇产物对映异构体比率的更多了解。这些组合的数据使我们能够提供通过催化反应的通量的模型。对于(R,R)-环氧,开环可能在两个C原子上发生并且具有类似的水解能垒,从而导致二醇对映异构体产物的混合物。但是,对于(S,S)-环氧化物,尽管任何一个环氧化物C原子都可以反应形成共价酶中间体,但是只有原-(R,S)烷基酶才适合随后的水解。因此,现在可以解释这种生物催化相关酶从动力学实验和产物比率得出的先前矛盾的观察结果。

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