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Mechanism of Thiosulfate Oxidation in the SoxA Family of Cysteine-ligated Cytochromes

机译:半胱氨酸连接的细胞色素的SoxA家族中硫代硫酸盐氧化的机制。

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摘要

Thiosulfate dehydrogenase (TsdA) catalyzes the oxidation of two thiosulfate molecules to form tetrathionate and is predicted to use an unusual cysteine-ligated heme as the catalytic cofactor. We have determined the structure of Allochromatium vinosum TsdA to a resolution of 1.3 Å. This structure confirms the active site heme ligation, identifies a thiosulfate binding site within the active site cavity, and reveals an electron transfer route from the catalytic heme, through a second heme group to the external electron acceptor. We provide multiple lines of evidence that the catalytic reaction proceeds through the intermediate formation of a S-thiosulfonate derivative of the heme cysteine ligand: the cysteine is reactive and is accessible to electrophilic attack; cysteine S-thiosulfonate is formed by the addition of thiosulfate or following the reverse reaction with tetrathionate; the S-thiosulfonate modification is removed through catalysis; and alkylating the cysteine blocks activity. Active site amino acid residues required for catalysis were identified by mutagenesis and are inferred to also play a role in stabilizing the S-thiosulfonate intermediate. The enzyme SoxAX, which catalyzes the first step in the bacterial Sox thiosulfate oxidation pathway, is homologous to TsdA and can be inferred to use a related catalytic mechanism.
机译:硫代硫酸盐脱氢酶(TsdA)催化两个硫代硫酸盐分子的氧化以形成四硫代酸盐,并预计将使用一种不常见的半胱氨酸连接的血红素作为催化辅因子。我们确定了异色变色菌TsdA的结构,分辨率为1.3Å。该结构证实了活性位点血红素的连接,确定了活性位点腔内的硫代硫酸盐结合位点,并揭示了从催化血红素通过第二个血红素基团到外部电子受体的电子转移途径。我们提供多种证据,表明催化反应是通过中间形成血红素半胱氨酸配体的S-硫代磺酸盐衍生物而进行的:半胱氨酸S-硫代磺酸盐是通过添加硫代硫酸盐或与四硫代酸盐逆反应而形成的;通过催化除去S-硫代磺酸酯修饰;使半胱氨酸烷基化会阻止活性。通过诱变鉴定了催化所需的活性位点氨基酸残基,并推断它们还起到稳定S-硫代磺酸盐中间体的作用。催化细菌Sox硫代硫酸盐氧化途径第一步的SoxAX酶与TsdA同源,可以推断其使用了相关的催化机制。

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