Escher-Trace: a web application for pathway-based visualization of stable isotope tracing data

摘要

Graph types available in Escher-Trace. a Mass isotopomer distribution. b Stacked mass isotopomer distribution. c Single isotopologue label. d Kinetic single isotopologue label*. e Abundance. f Stacked abundance. g Single isotopologue abundance**. h Kinetic single isotopologue abundance*. i Quantitative abundance***. j Kinetic total abundance*. k Enrichment****. l Kinetic enrichment* ****. (*) Requires time point information to be input using Analysis ➔ Enter Time Points in the Escher-Trace Menu. (**) Shown with individual data points plotted, accessed by setting Graph Attributes ➔ Plot Individual Values to ON. (***) Requires quantitative standard information to be input using Analysis ➔ Enter Quantitative Standards in the Escher-Trace Menu. (****) Requires element count of tracer of interest to be input using Data Displayed ➔ Isotopologues to Display in the Escher-Trace Menu. Note: All data used to make graphs in this figure were simulated