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A Proteomic Approach to Understand the Clinical Significance of Acute Myeloid Leukemia–Derived Extracellular Vesicles Reflecting Essential Characteristics of Leukemia

机译:一种蛋白质组学方法了解反映白血病基本特征的急性髓性白血病衍生细胞外囊泡的临床意义

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摘要

Extracellular vesicle (EV) proteins from acute myeloid leukemia (AML) cell lines were analyzed using mass spectrometry. The analyses identified 2450 proteins, including 461 differentially expressed proteins (290 upregulated and 171 downregulated). CD53 and CD47 were upregulated and were selected as candidate biomarkers. The association between survival of patients with AML and the expression levels of CD53 and CD47 at diagnosis was analyzed using mRNA expression data from The Cancer Genome Atlas database. Patients with higher expression levels showed significantly inferior survival than those with lower expression levels. ELISA results of the expression levels of CD53 and CD47 from EVs in the bone marrow of patients with AML at diagnosis and at the time of complete remission with induction chemotherapy revealed that patients with downregulated CD53 and CD47 expression appeared to relapse less frequently. Network model analysis of EV proteins revealed several upregulated kinases, including LYN, CSNK2A1, SYK, CSK, and PTK2B. The potential cytotoxicity of several clinically applicable drugs that inhibit these kinases was tested in AML cell lines. The drugs lowered the viability of AML cells. The collective data suggest that AML cell–derived EVs could reflect essential leukemia biology.
机译:通过质谱分析来自急性髓性白血病(AML)细胞系的细胞外囊泡(EV)蛋白质。分析鉴定了2450个蛋白质,包括461个差异表达的蛋白质(290上调和下调171个)。上调CD53和CD47,被选为候选生物标志物。使用来自癌症基因组Atlas数据库的mRNA表达数据分析AML患者存活和CD53和CD47表达水平之间的关联。表达水平较高的患者显示出比具有较低表达水平的患者的存活率显着劣等。 ELISA结果表达水平的CD53和CD47的表达水平来自EVS在诊断中的AML患者骨髓中的EVS和诱导化疗的完全缓解时显示,下调CD53和CD47表达的患者似乎越来越多地复发。 EV蛋白的网络模型分析显示出几种上调激酶,包括Lyn,CSNK2A1,SYK,CSK和PTK2B。在AML细胞系中测试几种抑制这些激酶的几种临床适用药物的潜在细胞毒性。药物降低了AML细胞的活力。集体数据表明,AML细胞衍生的EV可以反映必需的白血病生物学。

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