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Current status and future directions of ovarian cancer prognostic models

机译:卵巢癌预后模型的现状和未来方向

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摘要

Although the progression free survival of ovarian cancer has changed significantly with the introduction of PARP inhibitors [1,2], the prognosis is still poor, especially in advanced or recurrent cases [3]. The identification of prognostic factors and the development of prognostic models have a lengthy history, but to date, only clinicopathological findings, such as stage, histology, grade, and residual tumor, are generally considered to be reliable prognostic factors [4]. Although many prognostic models have been reported so far, none have been generalizable. This is because most previous studies have only analyzed single gene or protein expression as prognostic factors in cases at a single institution and examined their association with prognosis. This is problematic due to confounding by institutional bias and lack of reproducibility. It is interesting to note that an ovarian cancer risk score based on the expression of 10 ovarian cancer-related genes reported by Lu et al. [5] not only predicts chemo-response and clinical outcome, but also has been validated in The Cancer Genome Atlas (TCGA) database. In this study, an ovarian cancer risk score was established utilizing a univariate Cox proportional-hazards model based on the median expression levels of 10 target genes (GPC1, CYPB, MSLN, LIMK2, DOCK4, STK31, IGF1, CHI3L1, Survivin, and CBAP) on chemoresistance. Validation, using the TCGA database, demonstrated that patients with a high ovarian cancer risk score had significantly shorter median overall survival than those with a low ovarian cancer risk score. In the future, construction of prognostic models will require not only examination of cases from multiple institutions, but also validation using such databases. Additionally, factors used in prognostic models should include not only conventional cancer-related genes, but also factors from related metabolic processes. Cancer cells, including ovarian cancer cells, use glycolysis as a source of energy, which is characterized by high glucose uptake and active glycolysis, which converts glucose into lactic acid to produce ATP [6]. Prognostic models focusing on the Warburg effect, which is characteristic of these cancer cells, are also being investigated. Glycometabolism-related genes that are closely related to patient prognosis were screened by bioinformatics analysis with data from the Gene Expression Omnibus database. A risk score model based on five glycometabolism-related genes, including B3GAT3, COL5A1, FAM162A, IDUA, and PPP2R1A, to predict the prognosis of ovarian cancer patients was constructed [7]. From a metabolic perspective, 11 lipid metabolism genes (PI3, RGS, ADORA3, CH25H, CCDC80, PTGER3, MATK, KLRB1, CCL19, CXCL9 and CXCL10) were used to construct a prognosis prediction model with good prognostic ability for serous ovarian cancer [8]. Furthermore, mass spectrometry-based glycoproteomic characterization demonstrated that intact glycopeptide signatures of mesenchymal subtypes are associated with a poor clinical outcome in high-grade serous ovarian cancer [9]. In the future, a prognostic model focusing on the glycolytic activity of ovarian cancer may become a mainstream-model.
机译:虽然引入PARP抑制剂的卵巢癌的进展自由生存率发生了显着变化[1,2],但预后仍然差,特别是在先进或复发病例中[3]。预后因素的鉴定和预后模型的发展具有冗长的历史,但迄今为止,只有临床病理发现,例如阶段,组织学,等级和残留肿瘤,通常被认为是可靠的预后因素[4]。虽然到目前为止已经报告了许多预后模型,但没有一个是普遍的。这是因为最先前的研究仅在单一机构的病例中分析了单一基因或蛋白质表达作为预后因素,并检测其与预后的关联。由于机构偏见和缺乏可重复性,这是有问题的。值得注意的是,基于Lu等人报告的10个卵巢癌相关基因表达的卵巢癌风险得分。 [5]不仅预测了化学 - 反应和临床结果,而且还已在癌症基因组Atlas(TCGA)数据库中验证。在本研究中,利用基于10个靶基因的中值表达水平的单变量COX比例危害模型建立卵巢癌风险评分(GPC1,CYPB,MSLN,LIMK2,DOCK4,STK31,IGF1,CHI3L1,SURVIVIN和CBAP )化学渗透度。使用TCGA数据库的验证证明,具有高卵巢癌风险评分的患者,总生存率明显短于卵巢癌风险评分。未来,预后模型的构建不仅需要检查多个机构的病例,还需要使用此类数据库进行验证。另外,预后模型中使用的因素不仅应包括常规的癌症相关基因,还包括相关代谢过程的因素。癌细胞,包括卵巢癌细胞,用糖酵解作为能量来源,其特征在于高葡萄糖摄取和活性糖酵解,其将葡萄糖转化为乳酸以产生ATP [6]。还研究了专注于Warburg效应的预后模型,这是这些癌细胞的特征,也在调查。通过生物信息学分析,通过来自基因表达式综合数据库的数据进行筛选与患者预后密切相关的糖脂相关基因。基于五种甘草状相关基因的风险评分模型,包括B3GAT3,COL5A1,FAM162A,IDUA和PPP2R1A,以预测卵巢癌患者的预后[7]。从代谢角度来看,使用11种脂质代谢基因(PI3,RGS,Adora3,CH25H,CCDC80,PTING3,MATK,KLRB1,CCL19,CXCL9和CXCL10)构建具有良好血液癌的预后能力的预后预测模型[8 ]。此外,基于质谱的糖蛋白表征证明了间充质亚型的完整糖肽特征与高级浆液癌中的临床结果不良相关[9]。未来,专注于卵巢癌的糖酵解活性的预后模型可能成为主流模型。

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