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EEG-IP: an international infant EEG data integration platform for the study of risk and resilience in autism and related conditions

机译:EEG-IP:国际婴儿EEG数据集成平台用于研究自闭症及相关疾病的风险和适应力

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摘要

EEG-IP Architecture and Data Flow. Schematic of how “acquired data” flows from the acquisition site through the platform, and ultimately to “publications” output. White boxes represent data states and colored boxes represent coded procedures. Orange boxes represent procedures that may vary from project to project often handling the harmonization of unique data set features. The green box represents the maximally standardized process that is designed to run similarly across projects and is optimized for execution on HPC resources. The red box is the manual process in which each file is inspected and annotated by a reviewer. “Acquired data” enters the platform as unmodified raw data files in the “BIDS-EEG set” as “Source data”. The “source data” is then processed with the “initiation” to become “BIDS-compliant raw data” (open file format and containing the appropriate annotation files, etc.). Once the data are BIDS-compliant they are processed into the “BIDS-derivative Lossless” state beginning with a “staging” procedure designed to harmonize properties of the data (e.g., coregister channel locations to a standard head surface) then run through the “Lossless” pipeline. Each recording session file in the resulting “preprocessed data in Lossless state” is then examined by a reviewer in an optimized QC procedure that results in “reviewed data quality annotation”. From this pre-processed state the annotations are used to guide the post processing “feature extraction & hypothesis testing” procedures that result in the output “publications”
机译:EEG-IP体系结构和数据流。 “获取的数据”如何从获取站点流经平台,并最终流向“出版物”输出的示意图。白色框代表数据状态,彩色框代表编码过程。橙色框代表的程序可能因项目而异,通常会处理唯一数据集功能的协调问题。绿色框代表最大程度标准化的流程,该流程旨在在项目之间类似地运行,并针对在HPC资源上执行进行了优化。红色框是手动过程,其中每个文件都由审阅者检查和注释。 “获取的数据”作为未修改的原始数据文件进入平台,在“ BIDS-EEG集”中作为“源数据”。然后,将“源数据”与“初始化”一起处理,以成为“符合BIDS的原始数据”(开放文件格式并包含适当的注释文件等)。一旦数据符合BIDS要求,便将其处理为“ BIDS衍生无损”状态,首先要执行“分段”程序,该程序旨在协调数据的属性(例如,将通道位置共同注册到标准头表面),然后通过“无损”管道。然后,审阅者以优化的QC程序检查生成的“处于无损状态的预处理数据”中的每个记录会话文件,从而生成“审阅的数据质量注释”。从此预处理状态开始,注释将用于指导后处理“特征提取和假设测试”过程,从而产生输出“出版物”

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