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Electronic Structure of the Peroxy Intermediate and Its Correlation to the Native Intermediate in the Multicopper Oxidases: Insights into the Reductive Cleavage of the O-O Bond

机译:在多铜氧化酶中过氧中间体的电子结构及其与天然中间体的关系:对O-O键的还原裂解的见解。

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摘要

The multicopper oxidases (MCOs) utilize a blue type 1 (T1) copper site and a trinuclear Cu cluster comprised of a type 2 (T2) and a binuclear type 3 (T3) site that together catalyze the four-electron reduction of O2 to H2O. Reaction of the fully reduced enzyme with O2 proceeds via two sequential two-electron steps generating the peroxy intermediate (PI) and the native intermediate (NI). While a detailed description of the geometric and electronic structure of NI has been developed, this has been more elusive for PI largely due to the diamagnetic nature of its ground state. Density functional theory (DFT) calculations have been used to correlate to spectroscopic data to generate a description of the geometric and electronic structure of PI. A highly conserved carboxylate residue near the T2 site is found to play a critical role in stabilizing the PI structure, which induces oxidation of the T2 and one T3 Cu center and strong superexchange stabilization via the peroxide bridge, allowing irreversible binding of O2 at the trinuclear Cu site. Correlation of PI to NI is achieved using a two-dimensional potential energy surface generated to describe the catalytic two-electron reduction of the peroxide O-O bond by the MCOs. It is found that the reaction is thermodynamically driven by the relative stability of NI and the involvement of the simultaneous two-electron transfer process. A low activation barrier (calculated ~5–6 kcal/mol and experimental ~3–5 kcal/mol) is produced by the triangular topology of the trinuclear Cu cluster site, as this symmetry provides good donor-acceptor frontier molecular orbital (FMO) overlap. Finally, the O-O bond cleavage in the trinuclear Cu cluster can be achieved via either a proton-assisted or a proton-unassisted process, allowing the MCOs to function over a wide range of pH. It is found that while the proton helps to stabilize the acceptor O22− σ* orbital in the proton-assisted process for better donor-acceptor FMO overlap, the third oxidized Cu center in the trinuclear site assumes the role as a Lewis acid in the proton-unassisted process for similarly efficient O-O bond cleavage.
机译:多铜氧化酶(MCO)利用蓝色的1型(T1)铜位点和由2型(T2)和双核3型(T3)位点组成的三核Cu簇,它们共同催化O2的四电子还原为H2O 。完全还原的酶与O2的反应通过两个连续的两个电子步骤进行,生成过氧中间体(PI)和天然中间体(NI)。虽然已经对NI的几何和电子结构进行了详细的描述,但由于PI的基态具有反磁性,因此对于PI而言,它变得更加难以捉摸。密度泛函理论(DFT)计算已用于关联光谱数据,以生成对PI的几何和电子结构的描述。发现在T2位点附近的高度保守的羧酸盐残基在稳定PI结构中起关键作用,PI结构可诱导T2和一个T3 Cu中心的氧化,并通过过氧化物桥产生强大的超交换稳定性,从而使O2在三核上不可逆地结合铜网站。使用二维势能面可以实现PI与NI的相关性,该二维势能面的生成描述了MCO对过氧化物O-O键的催化两电子还原。发现该反应是由NI的相对稳定性和同时的两个电子转移过程的参与热力学驱动的。三核铜团簇位点的三角形拓扑结构产生较低的活化势垒(计算约5-6 kcal / mol,实验约3-5 kcal / mol),因为这种对称性提供了良好的供体-受体前沿分子轨道(FMO)交叠。最后,可以通过质子辅助或质子无辅助过程实现三核Cu簇中O-O键的裂解,从而使MCO在广泛的pH范围内起作用。发现在质子辅助过程中质子有助于稳定受体O2 2-σ*轨道以实现更好的供体-受体FMO重叠,但三核位点的第三个氧化Cu中心假定为在质子无助过程中起路易斯酸的作用,以类似方式有效地进行OO键裂解。

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