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Smokeless tobacco products harbor diverse bacterial microbiota that differ across products and brands

机译:无烟烟草制品带有多种细菌微生物群这些菌群在产品和品牌上有所不同

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摘要

Smokeless tobacco products contain numerous chemical compounds, including known human carcinogens. Other smokeless tobacco constituents, including bacteria, may also contribute to adverse health effects among smokeless tobacco users. However, there is a lack of data regarding the microbial constituents of smokeless tobacco. Our goal was to characterize the bacterial microbiota of different smokeless tobacco products and evaluate differences across product types and brands. DNA was extracted from 15 brands of smokeless tobacco products (including dry snuff, moist snuff, snus and Swedish snus) and 6 handmade products (e.g. toombak) using an enzymatic and mechanical lysis approach. Bacterial community profiling was performed using PCR amplification of the V1–V2 hypervariable region of the 16S rRNA gene, followed by 454 pyrosequencing of the resulting amplicons and sequence analysis using the QIIME package. Total viable counts were also determined to estimate the number of viable bacteria present in each product. Average total viable counts ranged from 0 to 9.35 × 107 CFU g−1. Analysis of the 16S rRNA gene sequences revealed high bacterial diversity across the majority of products tested: dry snuff products where characterized by the highest diversity indices compared to other products. The most dominant bacterial phyla across all products were Firmicutes, Proteobacteria, Actinobacteria and Bacteroidetes. Significant differences in both bacterial community composition and in-silico predicted gene content were observed between smokeless tobacco product types and between brands of specific smokeless tobacco products. These data are useful in order to comprehensively address potential health risks associated with the use of smokeless tobacco products.
机译:无烟烟草产品包含许多化学化合物,包括已知的人类致癌物。其他无烟烟草成分,包括细菌,也可能对无烟烟草使用者造成不利的健康影响。但是,缺乏有关无烟烟草微生物成分的数据。我们的目标是表征不同无烟烟草产品的细菌菌群,并评估产品类型和品牌之间的差异。使用酶和机械裂解方法从15种无烟烟草产品(包括干鼻烟,湿鼻烟,鼻烟和瑞典鼻烟)和6种手工制品(例如toombak)中提取DNA。使用16S rRNA基因的V1-V2高变区的PCR扩增进行细菌群落分析,然后对所得扩增子进行454焦磷酸测序,并使用QIIME软件包进行序列分析。还确定了总的活菌计数以估计每种产品中存在的活菌数。平均总生存计数范围为0到9.35×10 7 CFU g -1 。对16S rRNA基因序列的分析显示,在大多数测试产品中细菌的多样性很高:与其他产品相比,干鼻烟产品具有最高的多样性指数。在所有产品中,最主要的细菌菌群是Firmicutes,Proteobacteria,Actinobacteria和Bacteroidetes。在无烟烟草产品类型之间和特定无烟烟草产品品牌之间,细菌群落组成和硅内预测基因含量均存在显着差异。这些数据对于全面解决与使用无烟烟草制品相关的潜在健康风险很有用。

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