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Genotype-dependent changes of gene expression during somatic embryogenesis in oil palm hybrids (Elaeis oleifera x E. guineensis)

机译:油棕杂种体细胞胚发生过程中基因表达的基因型依赖性变化(油菜x几内亚E. guineensis)

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摘要

To understand the molecular processes triggered during the different steps of somatic embryogenesis (SE) in oil palm, the expression of 19 genes associated to SE identified in proteomic and transcriptomic studies was investigated by qRT-PCR. To evaluate the differential expression of these genes, two interspecific hybrid genotypes (Elaeis oleifera x Elaeis guineensis) contrasting for the acquisition of embryogenic competence were used. Aclorophyllated leaves of both hybrids, one responsive (B351733) and the other non-responsive (B352933) to SE were submitted to callus induction and collected at different time points: 0 (before induction), 14, 30, 90 and 150 days of callus induction (doi). The results obtained showed that all evaluated genes were downregulated at 14 doi in the responsive genotype when compared to the non-responsive. It was also possible to observe that most of the genes changed their expression behavior at 30 doi and were upregulated thereafter until 150 doi, with the exception of the pathogenesis-related PRB1-3-like (PRB1-3) gene, which did not show differential expression at 30 doi and was downregulated at 90 and 150 doi when compared to the non-responsive hybrid. These results indicate that 30 doi is a turning point in gene expression, probably associated to embryogenic competence acquisition. We also show that the expression behavior of the responsive genotype is more stable than that of the non-responsive when the different induction time points are compared to 0 doi (before induction). Moreover, the results obtained in this study corroborate our hypothesis that the regulation of genes involved in the control of oxidative stress and energy metabolism are crucial for the acquisition of embryogenic competence in oil palm.
机译:为了了解在油棕中体细胞胚发生(SE)的不同步骤中触发的分子过程,通过qRT-PCR研究了在蛋白质组学和转录组学研究中鉴定出的与SE相关的19个基因的表达。为了评估这些基因的差异表达,使用了两个种间杂种基因型(油菜(Elaeis oleifera)x球果(Elaeis guineensis))进行对比,以获取胚胎发生能力。两种杂种的叶状叶,对SE有反应(B351733)和对SE无反应(B352933)的另一种对叶进行愈伤组织诱导,并在不同的时间点收集:0(诱导前),14、30、90和150天感应(doi)。所获得的结果表明,与非反应性基因相比,所有评估基因的反应性基因型在14 doi下调。还可能观察到大多数基因在30个doi时改变了它们的表达行为,此后直到150 doi都被上调,除了与发病机理相关的类PRB1-3-like(PRB1-3)基因外,该基因没有显示与非反应性杂种相比,其在30个doi的差异表达,在90和150个doi的表达下调。这些结果表明30 doi是基因表达的转折点,可能与胚胎发生能力的获得有关。我们还显示,当将不同的诱导时间点与0 doi(诱导之前)进行比较时,响应基因型的表达行为比无响应基因型的表达行为更稳定。此外,在这项研究中获得的结果证实了我们的假设,即与氧化应激和能量代谢控制有关的基因调控对于油棕获得胚发生能力至关重要。

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